Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0686 ATGGTGGCGTGCAAGGATCAGGCACAATTCATGAAGGGCAAACGTACCAGGCGTCATAGGCCCCCCTCCCCACTAAGGCTCGCCATAGCCATGCCGCCTTCTGCAGCAGCCATCACCAATGACGTCTCTTCCGGCGGCTTCCACGTCGTCACAAACACGTCCTCATCTGAATTGAGGGATAGCAGTAGCACGCCTTCAACTACGACGCCGACCGAGGAAGAGGAGGACATGGCCAATTGTTTGATTCTTTTGGCTCGAGGCAAATTCTCGCACCCTAAGGATGGGGCATACTTTTACCAGTGCAAGACTTGTGACCGATCCTTCCGAGCCCTCGGCGTACACCGAGCCAGGCACAAGAAGATGAGGCCCAGCCCGGGAAACAATGGTTACGACGATTGCTGCACCAGCACTGCTCTCTCCTTGCAATTATCGAATAGCAGGGTTTCTTTGTATGGCGCTAAATCATCGTCCAACGTTCATGATTGTTCCATTTGTGGGGCTGAGTTCTCTTCTGGGCAAGCCTTGGGGGGGTCACATGAGAAGGCACAGAGCTTTGGTGAACGCCTCCGCAAGTACCACTATTACAAGCGGCCCCGAATCTCAAGACGTCAAGAAACCCAGAAACGTCTTTAA 633 0.5355 MVACKDQAQFMKGKRTRRHRPPSPLRLAIAMPPSAAAITNDVSSGGFHVVTNTSSSELRDSSSTPSTTTPTEEEEDMANCLILLARGKFSHPKDGAYFYQCKTCDRSFRALGVHRARHKKMRPSPGNNGYDDCCTSTALSLQLSNSRVSLYGAKSSSNVHDCSICGAEFSSGQALGGSHEKAQSFGERLRKYHYYKRPRISRRQETQKRL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0686 210 MobiDBLite consensus disorder prediction 49 75 - -
Lele16g0686 210 PANTHER ZINC FINGER PROTEIN ZAT5 57 177 - -
Lele16g0686 210 MobiDBLite consensus disorder prediction 49 74 - -
Lele16g0686 210 Pfam C2H2-type zinc finger 159 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0686 Lele-ChrLele16 3850869 3851501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0686 3 177 C2H2 Transcription Factor Family AT5G04390 36.100 9.70e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele16g0686 zf-C2H2_6 2.7e-06 CL0361