Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0668 ATGTCACAAGATTCTGTCGAGATAAAGACGATTGAGCAGTGGAGATGGTCGGAAATGCAAGGCCTTGAGCTCGTCTCTCCTGCTCCTATGTCTGACCCTCACACAACACCACCAACACAAACAGAGGAAAACAGAGAGGCGAAGCCAATGGAGGCTGCTCAAGAGGGAGAGCGAAAGGAAGTTGCAAGTCTCGCAAATGGTAGTGCTGGCGGTGGAAGTAGCAGCAGTAGTGGGGAGAAGCCTGAGAATATTCCGGCTGTTGCATTTGGCGAGCTTTTCAGATTTGCCGATGGGTTGGATTACGTTCTGATGGCTATAGGAACGGTCGGAGCAATCGTGCACGGTTGTTCTCTGCCTTTATTTCTCCGGTTCTTCGCCGATCTCGTCAATTCTTTTGGGTCGAATGCCAATAATGTGGACAAGATGACCCAGGAAGTCGTCAAGTACGCATTTTACTTCCTGGTGGTGGGTGCTGCTATATGGGCATCATCATGGGCAGAGATATCTTGCTGGATGTGGACTGGCGAGAGGCAATCAACGAAGATGAGGATCAAATACCTTGAAGCTGCCTTAAACCAGGACATTCAATACTTTGACACCAAGGTTAGAACATCTGACGTCGTTTTTGCCATCAACACTGATGCAGTCATGGTCCAGGACGCCATTAGCGAGAAGCTGGGTAATTTCATTCACTACATGGCGACTTTTGTTTCTGGATTTGTGGTGGGTTTCACCGCCGTTTGGCAATTAGCTCTTGTTACTCTGGCCGTAGTCCCTATGATAGCTATAATCGGAGGCATTCACACCACCACCTTGACGAAGCTCTCAGCCAAGGGCCAAGAAGCTCTCTCTAAAGCTGGAAACATCGTGGAGCAGACGATCGTGCAGATTCGAGTAGTACTGGCTTTCGTTGGTGAGAGTCGAGCGTTACAGGACTACTCTTCGGCGTTGAAGGTAGCCCAAAAGAATGGCTACAAAAGTGGGTTCGCGAAGGGTATGGGATTAGGCGCGACATACTTTGTCGTTTTCTGCTGTTATGCGCTCCTTCTATGGTACGGCGGTTACCTCGTCAGGCACCACTACACCAATGGAGGCCTCGCCATCTCCACCATGTTCGCTGTTATGATTGGCGGATTGGGTTTGGGGCAATCTGTGCCGAGCATCGCTGCATTCACAAAGGCTAGAGTCGCTGCCACAAAAATTTTCCGAATCATCGATCACAAACCGAGTGTAGACCGGAATGTTGATTCGGGTTTGGAATTAGAGTCCGTGACTGGGTTAGTTGAGCTCAAGAATGTAGATTTCTCATACCCGTCAAGGCCAGATGTTCGGATCCTCAATAATTTCTCTTTGAATGTGCCCGCCGGCAAGACCATCGCTTTGGTTGGCAGCAGTGGCTCCGGCAAGAGCACCGTCGTCTCCCTCATCGAGAGATTCTACGACCCCACTTCAGGACAAGTTCTGCTAGATGGACATGACATTAAAACCCTGAAACTGAGATGGCTGAGGCAGCAAATAGGACTTGTAAGCCAAGAGCCTGCTTTATTTGCAACCACCATCCGAGAAAATATATTGTTGGGTAGGCCTGATGCCGACCAAGTGGAGATCGAAGAAGCTGCAAGAGTGGCTAACGCTCATTCGTTTATTATCAAACTCCCCGAAGGCTACGAGACCCAGGTAGGAGAGAGAGGATTGCAACTTTCTGGAGGCCAAAAGCAGAGAATAGCAATAGCAAGGGCAATGCTGAAGAACCCAGCAATTCTTCTCTTGGATGAGGCCACAAGTGCATTAGACTCTGAATCTGAAAAGCTAGTGCAAGAAGCCCTTGACCGGTTCATGATTGGTAGAACAACTCTTGTAATTGCCCATCGCCTCTCCACCATTCGCAAAGCTGACCTTGTGGCCGTGCTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCACGATGAGCTCTTAGCTAAGGGTGAAAATGGAGTTTATGCCAAGCTCATCCGGATGCAAGAAATGGCCCATGAAACTGCCATGAATAATGCCAGAAAGAGCAGTGCAAGGCCTTCAAGTGCAAGAAATTCTGTGAGTTCCCCGATAATTGCTCGGAATTCTTCTTATGGCCGCTCACCATATTCACGCAGGCTATCTGACTTCTCAACTTCTGATTTTAGTCTATCCCTTGATGCTTCACATTCAAACTACAGGCTTGAAAAGCTTGCCTTCAAAGAGCAAGCCAGTTCCTTTTGGCGCCTTGCAAAAATGAATTCTCCTGAATGGCTTTATGCTTTCGTTGGTTCTATAGGCTCTGTTGTTTGCGGATCTCTCAGTGCATTCTTTGCTTATGTTCTCAGTGCTGTCCTCAGTGTCTATTACAATCCAAACCACAGATACATGATCCGAGAAATAGAAAAGTACTGTTACTTGTTGATTGGGCTTTCATCAGCTGCACTTCTCTTCAATACACTGCAGCACTTCTTTTGGGATATTGTTGGTGAAAACCTTACTAAACGAGTGCGGGAGAAAATGCTTACTGCTGTGCTGAAAAATGAAATGGCTTGGTTTGATCAGGAGGAAAATGAGAGTGCTCGTGTTGCAGCAAGGCTCGCCCTTGATGCCAACAATGTTAGATCAGCCATTGGAGATCGGATTTCAGTAATTGTGCAGAATACTGCACTTATGTTAGTTGCTTGTACCGCAGGGTTTGTATTGCAATGGCGCCTTGCCCTTGTCCTCATAGCCGTCTTCCCCGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGAGACTTGGAAGCGGGGCATGCCAAGGCCACACAACTTGCAGGGGAGGCTATAGCAAATGTAAGAACTGTTGCGGCCTTCAATTCAGAAACAAAAATCGTTGGTCTTTTCACTTCCAACCTTGAAACTCCACTAAGACGTTGCTTCTGGAAGGGGCAAATTTCTGGAAGTGGATTTGGGATAGCTCAGTTTGCGCTTTATGCTTCATATTCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCATGGAATCTCTGATTTCTCTAAAACAATCAGAGTCTTTATGGTCCTTATGGTCTCTGCCAATGGTGCTGCTGAAACTTTAACCCTGGCTCCTGACTTCATTAAGGGAGGTCGAGCCATGAGGTCAGTCTTTGAGCTTCTTGATCGTAGAACTGAAATTGAACCAGATGACCCAGACGCTATCCCTGTTCCTGATCGGCTTCGTGGAGAAATTGAACTCAAGCATGTAGACTTCTCTTACCCCACTCGCCCAGATATGCCAGTTTTCCGTGATCTTAGTCTTCGTGCTAGGGCGGGTAAAACTCTTGCCCTTGTAGGACCTAGTGGCTGTGGTAAGAGCTCAGTGATTGCACTTGTACAGAGATTCTATGATCCAACTTCTGGGCGGGTTATGATTGATGGAAAGGACATCAGAAAATACAATCTCAAGTCCCTCCGAAGACACATTGCCATTGTACCTCAAGAGCCTTGTTTGTTTGCTTCTTCTATACATGAAAACATAGCTTATGGGAATGATTCAGCAACTGAAGCTGAGATAATTGAAGCAGCTACTCTTGCCAATGCTGACAAATTCATATCGGGCTTGCCAGATGGATACAAGACCTTTGTTGGGGAAAGAGGAGTTCAGCTATCTGGAGGACAAAAACAGAGAATAGCGATAGCCCGGGCTTTTGTGAGGAAGGCAGAGATTATGCTTCTCGATGAGGCCACAAGCGCGCTTGACGCAGAATCCGAGAGGTCTGTTCAAGAGGCTCTAGACCGTGCTTGTTCTGGAAAAACTACTATTATTGTTGCTCACAGGCTATCAACTATTAGAAATGCCAATGTGATCGCGGTGATTGATGATGGGAAAGTGGCAGAGCAAGGATCTCACTCGCATTTGTTGAAAAATCACCCTGATGGGATATATGCACGCATGATTCAATTACAAAGGTTCACACACACCCAAGTTATTGGTATGGCCTCTGGGTCAACTTCTGCAAGACCAAAAGATGATGATGCAAGAGAAGGTTAG 4050 0.4689 MSQDSVEIKTIEQWRWSEMQGLELVSPAPMSDPHTTPPTQTEENREAKPMEAAQEGERKEVASLANGSAGGGSSSSSGEKPENIPAVAFGELFRFADGLDYVLMAIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANNVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTKVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAIIGGIHTTTLTKLSAKGQEALSKAGNIVEQTIVQIRVVLAFVGESRALQDYSSALKVAQKNGYKSGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAISTMFAVMIGGLGLGQSVPSIAAFTKARVAATKIFRIIDHKPSVDRNVDSGLELESVTGLVELKNVDFSYPSRPDVRILNNFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELLAKGENGVYAKLIRMQEMAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHSNYRLEKLAFKEQASSFWRLAKMNSPEWLYAFVGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRYMIREIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARVAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAGHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLETPLRRCFWKGQISGSGFGIAQFALYASYSLGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDPDAIPVPDRLRGEIELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAIVPQEPCLFASSIHENIAYGNDSATEAEIIEAATLANADKFISGLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSHLLKNHPDGIYARMIQLQRFTHTQVIGMASGSTSARPKDDDAREG 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0668 1349 FunFam ABC transporter B family member 1 91 425 - -
Lele16g0668 1349 FunFam ABC transporter B family member 1 1074 1323 - -
Lele16g0668 1349 Gene3D - 1074 1329 IPR027417 -
Lele16g0668 1349 PANTHER ABC TRANSPORTER B FAMILY 73 771 - -
Lele16g0668 1349 Gene3D ABC transporter type 1, transmembrane domain 151 1056 IPR036640 GO:0005524|GO:0016020
Lele16g0668 1349 SUPERFAMILY ABC transporter transmembrane region 747 1070 IPR036640 GO:0005524|GO:0016020
Lele16g0668 1349 FunFam ABC transporter B family member 1 418 668 - -
Lele16g0668 1349 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 105 393 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele16g0668 1349 Pfam ABC transporter 1102 1250 IPR003439 GO:0005524
Lele16g0668 1349 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1083 1319 IPR003439 GO:0005524
Lele16g0668 1349 MobiDBLite consensus disorder prediction 22 81 - -
Lele16g0668 1349 SMART AAA_5 1110 1302 IPR003593 -
Lele16g0668 1349 SMART AAA_5 455 641 IPR003593 -
Lele16g0668 1349 CDD ABC_6TM_Pgp_ABCB1_D1_like 104 401 - -
Lele16g0668 1349 ProSitePatterns ABC transporters family signature. 1222 1236 IPR017871 GO:0005524|GO:0016887
Lele16g0668 1349 Gene3D - 426 691 IPR027417 -
Lele16g0668 1349 SUPERFAMILY ABC transporter transmembrane region 92 412 IPR036640 GO:0005524|GO:0016020
Lele16g0668 1349 MobiDBLite consensus disorder prediction 67 81 - -
Lele16g0668 1349 FunFam ABC transporter B family member 19 1049 1071 - -
Lele16g0668 1349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1075 1322 IPR027417 -
Lele16g0668 1349 CDD ABC_MTABC3_MDL1_MDL2 1083 1322 - -
Lele16g0668 1349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 667 IPR027417 -
Lele16g0668 1349 ProSitePatterns ABC transporters family signature. 567 581 IPR017871 GO:0005524|GO:0016887
Lele16g0668 1349 Pfam ABC transporter transmembrane region 763 1030 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele16g0668 1349 Pfam ABC transporter transmembrane region 104 377 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele16g0668 1349 CDD ABC_MTABC3_MDL1_MDL2 428 667 - -
Lele16g0668 1349 CDD ABC_6TM_Pgp_ABCB1_D2_like 749 1065 - -
Lele16g0668 1349 Pfam ABC transporter 446 595 IPR003439 GO:0005524
Lele16g0668 1349 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 760 1047 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele16g0668 1349 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 428 664 IPR003439 GO:0005524
Lele16g0668 1349 MobiDBLite consensus disorder prediction 39 58 - -
Lele16g0668 1349 FunFam ABC transporter B family member 1 739 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0668 Lele-ChrLele16 3744776 3750543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0668 80 1346 Calmodulin-binding Proteins AT2G36910 88.565 0.0 2306