Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0657 ATGAAGTGCTTTCCATTCCACTACGGACATAAGAAGGATGATCCGAAGAGCATTAAGTCAATTTCGGGTCTGTCCAACCTTTCCACATATGTCGAGGGTGATCTGAGAAGATCTGGCTCTGAGTTAAATTCTCAGAATGCTTCCGATAATAGTACAGACTCCCTTAGGAGAACTTCGTTTCCCAGTTTGTCTCAAAGACCCAGCAACCTGAGAGTGTTTACGGTGTCTGAACTGAAATCGGCCACTAAAAATTTTGGCCGCACTGTTATGATTGGGGAGGGTGGGTTTGGCTGTGTCTACAAGGGAATGATCAAGAGCTTAGAGGACTCACCCAGAAAAATTGAAGTTGCAGTTAAACAACTTGGTAGAAGAGGAATGCAGGCAAGAGCTTTCCCTCCTTTTCCCCCCTCTTTAAATTATGTCATCTTATGTAATAATACAAGGCATAGTAAGCATATTGCAATGCGTAGTACTGTTTTTGGGACTTTGAGTAGTCACATAAGTTTGCTTCAACTAGAGACAGTTATAAGTTTGAAGATTGTGGGCCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCTAATCTTGTGAAACTTGTGGGTTACTGTGCTGATGATGATGAAAGAGGAATCCAGAGGCTTCTGGTTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCCCCCCGGTCAGAGACCCCTCTCTCATGGAGTAAGAGATTAAAAATAGCTCAGGGTGCAGCTCGTGGCTTAACATATCTTCATGAAGAAATGGATTTTCAGGTTGTTGGAACAATGGGATACGCAGCTCCTGAATATATTCAAACTGGACGTCTTACATCAAAAAGCGATGTGTGGAGTTATGGCGTATTTCTCTATGAACTCATCACTGGTCGGCGCCCCGTGGATCGAAATCGTCCCAAGGGTGAACAAAAGCTCTTGGAATGGGTAAGGCCATACCTATCAGATGGGAAAAAATTTCAACTGATATTGGATCCAAGGCTTGACAGGAAACCCCTCATCAAGTCAGCAAAGAGACTTGCCATTATAGCTAACGGATGCTTGGTCAAAAGCCCCAAGAATCGCCCAAAAATGAGTGAGGTATTGGAAATGGTGAATCGACTTGTAGAATCTTCAACTGTCAGTAGTCCACAGATACCCTTGAAGAGTTCGGCATCCGCTGAAGTTCCCCACGGCACTGAAACAAAGAAAAAGAGAAGGATCATGGATCTTAAACCTGGAGAAAATAGTTGCAATTCTCCTCTAACGATGGGTATAAAGATTTTAGCTTGCGCAGCAATTCGAGGAAATTTTGGGAAAGCTATTGAAGAAAGTAACGAACGATTCATGAATTTCAAGGGAAACACATGGATCATCGGATTGTTATTCTGGTTCTGGGCGAAGTCATATGATAATACTGAGAATTGTGAAATACTACGGTTGGAGTTATGCTTCGATCATTGTATGCATATGCATATTGTCTATTTTGCTGTTGAGGATTCTTCTCGTGGCAACTTAGACTTCAAATTCCTCCAGATATGGCTCTATGATATGTATGACTTAGTGGAACATAAGCTCAAGTCTCATCTGGAGATTTATGACGAGGAAAATGTTCCCATGAAATTTGGCGACAGTTCAGATAAAATGTCGAGGGCTAGGGAGGTGAAGGAGAGCAACACAGGCCAAAGTAATCATCATCATCATCAACATCAACAACAGCAAGAGGATCAGCAAATTTGCGACCCTTGCAAGTCCTTTGGGCAGAAGTGCAGCCACCTGGTGAAGAAGCAGAGAGCAAAATTCTACATTGTTCGTCGTTGCATAGCGATGCTTCTGTGTTGGCATGAGCGTGGCGAGCACTGA 1884 0.4283 MKCFPFHYGHKKDDPKSIKSISGLSNLSTYVEGDLRRSGSELNSQNASDNSTDSLRRTSFPSLSQRPSNLRVFTVSELKSATKNFGRTVMIGEGGFGCVYKGMIKSLEDSPRKIEVAVKQLGRRGMQARAFPPFPPSLNYVILCNNTRHSKHIAMRSTVFGTLSSHISLLQLETVISLKIVGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLSWSKRLKIAQGAARGLTYLHEEMDFQVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPVDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLDRKPLIKSAKRLAIIANGCLVKSPKNRPKMSEVLEMVNRLVESSTVSSPQIPLKSSASAEVPHGTETKKKRRIMDLKPGENSCNSPLTMGIKILACAAIRGNFGKAIEESNERFMNFKGNTWIIGLLFWFWAKSYDNTENCEILRLELCFDHCMHMHIVYFAVEDSSRGNLDFKFLQIWLYDMYDLVEHKLKSHLEIYDEENVPMKFGDSSDKMSRAREVKESNTGQSNHHHHQHQQQQEDQQICDPCKSFGQKCSHLVKKQRAKFYIVRRCIAMLLCWHERGEH 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0657 627 Gene3D Transferase(Phosphotransferase) domain 1 161 265 - -
Lele16g0657 627 Pfam Protein tyrosine and serine/threonine kinase 183 264 IPR001245 GO:0004672|GO:0006468
Lele16g0657 627 SUPERFAMILY Protein kinase-like (PK-like) 59 379 IPR011009 -
Lele16g0657 627 Pfam Protein kinase domain 268 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0657 627 ProSiteProfiles Protein kinase domain profile. 85 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0657 627 MobiDBLite consensus disorder prediction 36 63 - -
Lele16g0657 627 MobiDBLite consensus disorder prediction 550 580 - -
Lele16g0657 627 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Lele16g0657 627 Gene3D Phosphorylase Kinase; domain 1 59 156 - -
Lele16g0657 627 Gene3D Transferase(Phosphotransferase) domain 1 266 397 - -
Lele16g0657 627 PANTHER OS01G0588500 PROTEIN-RELATED 48 264 - -
Lele16g0657 627 Pfam DVL family 602 620 IPR012552 GO:0008285
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0657 Lele-ChrLele16 3673892 3680363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0657 1 416 Glycoside Hydrolase AT3G07070 30.720 1.56e-49 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele16g0657 Pkinase 2.4e-13 CL0016