LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g0645	ATGCAAATCCTCTGTGCGCATAGCTTTCGAGGGGTTTCTTCTTCTGTCTTTCTTCAGCTACTGCTCTTCCTGTTCTCAAATTGCGCATATGGGTTTGGGACGATGGGGCCAATATCGGCCTCATTTGGTAAATATGAATTCTTCTGCGCAATCGATGTAAGCGGGAAGCAGGATGTCATTTGCTGGGGGAGGAACATCACTTCATCGGTTACACCGTCTTCTTCAGCTTCAGCCTCTGTTACTGACAGCCCTCCCATGGCAGCTTTATCCGGTGGCGAAGGATTTATGTGTGGCATTCTAGCAAGCACTTCGCAAGCATACTGCTGGAGCGCCACAAAACCAGCAATAGATCTTGTGCCTCCTCAATACCAATCCCATGCTTATTCTCAAATAGCAGCAGGCAAGAATCACGTTTGTGCCATCAGGGGATATTATTATTCTAATGAAGATTCCGGAATTGTTGATTGTTGGGAAATTGTGAGAACTGCGGACAACAGCTTAAAATGGAAACAGAGCGATTTGTATTACGATCAGTCAACTAGCAATCTTGCATTAAACAAAGTTGTAGCAGGTGAGGGATTCGCTTGTGGTGCGGTCAGAGACGGAGGGCTTGTCTGTTGGGGACCTACATCCGCGAGCTTAGGGGTATCGAATGTGTCCGAGAACTTCTCAGTCTTGGTTTCTGGAAGGAGTTCAATTTGTGGGCTTTTGAACGTTTCTGGAGATTTGAAATGTTGGGGCGATTCAGATTCGTTTGCTGATCCACCTGATGGGGTCGGATTAATCTATCTGTCAGCTGGGGCTCGCCATTATTGTGGTATCCGAGCAGATGATCATATAGTGGAGTGTTGGGGGAGTTTCAATTCGTCTGTGGTTCCAAAAGGTTCTGGATTTATGGCAATCGCTTCTTCAGATTATACAACTTGTGGCGTTAGAGAGGAAGATCTTCTGATGGATTGCTGGTTGGTGAATGCGTCCACGGCCGAGTTTGATTCTCCTTTGGAATTATCAAGTCCAGGTCTCTGCAGTTCCAGTTCATGCAATCAAGGTGAGTTTGCTTTCAATGTTAGTGTTTTGAATGAGCCAGGTTTAACAAACCTCTGCGTTCGAAAAGATTTGAGGATCTGTTCGCCCTGTGGCTCAAATTGTTCAGAAGGCTTTTTCTTGTCCAGTCCATGCACTGAGAATTTCGACAGGGTATGCACTGCTTGTTCTCTTTGCCAAAACAGCTCCTGCTGGGATGTTTGTCGACTTGAGTCATCTCCAGATATTGTTCATAAGAAAAGCTGGCACCATTTGCGTAGATTGCTGATCATAATTGGGTCAGCTACTTTGGGATTCTTGTTTATCATGACTTGTGGGTGTATTCTTCCATGTCTGATTAGTAAGAAAGAATCCAAATCTGGCACGGCCAAACAAGAGCAGCAAGTTGATCTTAATGTTGATCTTCATTCTTTTCCTTCTACAACTTCCTGTCCTGGGATGCCTCAGATTTTCCGACTCTCAGAGCTAAAGGATGCCACTAATGGATTCAAGGAATTCAACGAGCTTGGTAGAGGAAGTTATGGCTTTGTATACAAAGCTGTATTAGCAGATGGCAGGGTAGTTGCAGTGAAGAGGGCCAATGCTGCCACAATTATCCACACAAACAATCGTGACTTTGAAATGGAACTGGAAATCCTCTGCAAAATCCGTCACTGTAATATCGTCAACTTGTTGGGTTACTGTGCAGAGATGGGAGAGAGGCTTCTTGTTTACGAGTATATGCCACATGGCACTCTTTACGATCACCTTCATGGTGGACTTTCTCAACTGAATTGGAGCCTCAGGCTAAAGATATCAATGCAAACTGCTAAAGCTCTCGAGTATCTGCAAAAGGAACTAACCCCACCAATTGTGCATAAGGATCTTAAAAGTTCAAACATTCTCTTGGATTCTGAATGGGGAGCGAGAATGTCGGACTTTGGACTGCTCACTTCTGGTGACAAAGATCAAAATGGGGATGTACAGAGCGATGTTTACAACTTTGGGATTGTGTTGCTTGAGATTCTTAGTGGAAGAAAAGCTTATGACGGAGATTTCATGCCTCCCAACATAGTTGAGTGGGCAGTGCCTCTGATCAAACAGGGGAAAGCTGCTGCCATAATTGATCGCTCTGTACCTCTTCCAAGGATCGTTGAGCCATTGCTGAAGCTAACTGATATTGCAGAGCTTGCTGTTAGACACAATCCCAGCGAGCGTCCCGCTATGTCAGAGATAGCATCTTGGTTGGAGCAGATTGTGAAGGACGGTTTGATCTTATAG	2304	0.4492	MQILCAHSFRGVSSSVFLQLLLFLFSNCAYGFGTMGPISASFGKYEFFCAIDVSGKQDVICWGRNITSSVTPSSSASASVTDSPPMAALSGGEGFMCGILASTSQAYCWSATKPAIDLVPPQYQSHAYSQIAAGKNHVCAIRGYYYSNEDSGIVDCWEIVRTADNSLKWKQSDLYYDQSTSNLALNKVVAGEGFACGAVRDGGLVCWGPTSASLGVSNVSENFSVLVSGRSSICGLLNVSGDLKCWGDSDSFADPPDGVGLIYLSAGARHYCGIRADDHIVECWGSFNSSVVPKGSGFMAIASSDYTTCGVREEDLLMDCWLVNASTAEFDSPLELSSPGLCSSSSCNQGEFAFNVSVLNEPGLTNLCVRKDLRICSPCGSNCSEGFFLSSPCTENFDRVCTACSLCQNSSCWDVCRLESSPDIVHKKSWHHLRRLLIIIGSATLGFLFIMTCGCILPCLISKKESKSGTAKQEQQVDLNVDLHSFPSTTSCPGMPQIFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSQLNWSLRLKISMQTAKALEYLQKELTPPIVHKDLKSSNILLDSEWGARMSDFGLLTSGDKDQNGDVQSDVYNFGIVLLEILSGRKAYDGDFMPPNIVEWAVPLIKQGKAAAIIDRSVPLPRIVEPLLKLTDIAELAVRHNPSERPAMSEIASWLEQIVKDGLIL	767

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g0645	767	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4	15	761	-	-
	Lele16g0645	767	ProSiteProfiles	TNFR/NGFR family cysteine-rich region domain profile.	346	401	IPR001368	GO:0005515
	Lele16g0645	767	FunFam	serine/threonine-protein kinase-like protein CCR1	480	588	-	-
	Lele16g0645	767	ProSitePatterns	Protein kinases ATP-binding region signature.	517	539	IPR017441	GO:0005524
	Lele16g0645	767	Gene3D	Phosphorylase Kinase; domain 1	472	588	-	-
	Lele16g0645	767	ProSiteProfiles	Protein kinase domain profile.	511	757	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele16g0645	767	SUPERFAMILY	RCC1/BLIP-II	38	289	IPR009091	-
	Lele16g0645	767	Gene3D	-	180	331	IPR009091	-
	Lele16g0645	767	Gene3D	-	31	179	IPR009091	-
	Lele16g0645	767	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	632	644	IPR008271	GO:0004672\|GO:0006468
	Lele16g0645	767	Pfam	Protein tyrosine and serine/threonine kinase	515	665	IPR001245	GO:0004672\|GO:0006468
	Lele16g0645	767	SUPERFAMILY	Protein kinase-like (PK-like)	485	758	IPR011009	-
	Lele16g0645	767	Gene3D	Transferase(Phosphotransferase) domain 1	589	764	-	-
	Lele16g0645	767	SMART	serkin_6	511	757	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele16g0645	767	FunFam	Serine/threonine-protein kinase-like protein CCR1	666	764	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g0645	Lele-ChrLele16	3597747	3600050	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g0645	16	759	Receptor kinase-like Gene Family	AT3G59420	31.946	2.97e-113	362

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Lele16g0645		PK_Tyr_Ser-Thr	3.7e-30	CL0016