Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0644 ATGAAGATTCTCTGTTCTTTGTCTACTTGTTTCTCACCATCGGTCCAAGACCAAACCACCAAGCAAGGAAGAGAGAGCGAAGGCACGTTTCGAGTATTCACGTACAGCGAATTAAAATCTGCGACGAGGAGTTTCGATTCCTCAAACAAGATCGGACAAGGCGGTTTCGGCACTGTGTACAAGGGGCGGCTTCTGGATGGCACATTTGTGGCGGTCAAAGTTCTTTCTATCGAACTGGATTCGCTGCGAGGAGAGAAGGAATTTGTAGCAGAACTGGGTACTCTGGGAAATATCAAGCACCAAAACCTAGTATCTCTTCGAGGTTGTTGTGTGGAAGGAGCTCGCAGATACTTAGTCTACGAGTACATGGTAAACAACAGTCTTCACCACTACTTTTTAGGTTCACAGGAGGGCAGGATGAGATTCGACTGGGAATCAAGGAGAAAAGTATCCATAGGAGTGGCTCAAGGGCTTGCTTATCTTCACGAGGAAATTAAGCCTTATATTGTGCACAGGGACATCAAGGCCAGGAATATACTTCTTGATCGACATTTGAGGCCAAAAGTTTCCGACTTTGGTCTGGCTAAGTTGTTGAGAGACGACAAGTCTTACGTTAGCACTCAAGTCGCAGGGACATTGGGTTATCTTGCTCCGGAATATGCCAGTTCAGGGAAGGTGACAAGAAAATCAGATGTCTACAGCTACGGAATATTACTCCTCGAAATTGTCAGCGGCCTACCAGTGGTTGATCGTTACCAAGATACGGAACGTTTCCTCGTTGAGAAGGCGTGGTCGGCTTATGAAGCTGAGGATTTATCGAAAATGGTGGATGCAGAGCTAAAACAGAGCTTCCCAGAGGAAGAAAGTGTGCGATTCCTGAAGGTGGGGCTGCTTTGCGTGCAAGAAACAGCGAAGCTGAGACCACGAATGACAGAAGTAGTTGAAATGTTGAGCAACAATACTGAAATGGCAAGTGTGAGCATTTCAAAACCAGGGCTTGTGCCTGATCTCAGGGCCATCAGAATCAGAGACGCACCCCATTCAGAGGCTTCAACCTCCAGTGCAGCAACCTACGCAACTTCCACTTGGAGTTCGGCCAAGCTTGCCCGTTAA 1113 0.4726 MKILCSLSTCFSPSVQDQTTKQGRESEGTFRVFTYSELKSATRSFDSSNKIGQGGFGTVYKGRLLDGTFVAVKVLSIELDSLRGEKEFVAELGTLGNIKHQNLVSLRGCCVEGARRYLVYEYMVNNSLHHYFLGSQEGRMRFDWESRRKVSIGVAQGLAYLHEEIKPYIVHRDIKARNILLDRHLRPKVSDFGLAKLLRDDKSYVSTQVAGTLGYLAPEYASSGKVTRKSDVYSYGILLLEIVSGLPVVDRYQDTERFLVEKAWSAYEAEDLSKMVDAELKQSFPEEESVRFLKVGLLCVQETAKLRPRMTEVVEMLSNNTEMASVSISKPGLVPDLRAIRIRDAPHSEASTSSAATYATSTWSSAKLAR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0644 370 CDD STKc_IRAK 51 317 - -
Lele16g0644 370 Pfam Protein tyrosine and serine/threonine kinase 48 317 IPR001245 GO:0004672|GO:0006468
Lele16g0644 370 ProSiteProfiles Protein kinase domain profile. 45 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0644 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lele16g0644 370 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Lele16g0644 370 Gene3D Transferase(Phosphotransferase) domain 1 123 330 - -
Lele16g0644 370 SMART serkin_6 45 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0644 370 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 364 - -
Lele16g0644 370 Gene3D Phosphorylase Kinase; domain 1 7 122 - -
Lele16g0644 370 SUPERFAMILY Protein kinase-like (PK-like) 28 331 IPR011009 -
Lele16g0644 370 FunFam Serine/threonine-protein kinase receptor 15 122 - -
Lele16g0644 370 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0644 Lele-ChrLele16 3591146 3592754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0644 33 336 Receptor kinase-like Gene Family AT1G56120 50.492 1.36e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele16g0644 PK_Tyr_Ser-Thr 8e-50 CL0016