Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0637 ATGACTGAGATCCTTATCATGCAAGTAAAACCAGCGTCTTTAATTTCAGCCACTTGGTTTTTATACTTTGTTTTGAAGTTTTCTGGTGAAGGGATTACTGTTCCTCGTTATCTTGTGCTTACAGCTACCAATGGGATACGAAACTTCACGGCGATAGGCAATGTAGACGTGGATGTTCCTATACCACAAGGCTACACCGAATCATGTGATAAAGATCAGGACTGGATTTCGGTGCCAAGCAACACCATGAGCGTCATCGACCTTCTGACCAGAGTCGATTCGATCTGTAAGAAGTACGATAAATACGACATCGACAAGCACAAGGATTCTAATGTTTCTGGCGACGATGCCTTTGCTCGACTATACGCCGTTGTCGACGCCGACATCGAGGCTGCTCTTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAAGTAGGGCATCTACCGTGGCGATCAACGCGGAGCTTCGTCGTACCAAGGCTCGGCTGCTGGAGGAGGTCCCCAAGTTGCAGAGGCTGGCGGTCAAAAAGGTAAAGGGGCTTCAACCAGAAGAATTTGCTGCACGTAATGATTTGGTTCTTGCATTGCCAGACAGGATCCAAGCTATCCCGGATGGGGCTCCAGCTGCCCCCAAACAAACTGGAGGCTGGGCAGCTTCTGCTTCACGTACTGAAATTAAATTTGATTCAGATGGGCAATTTGACAATGAATACTTCCAGCAAACTGAGGAATCAAGTGGATTCAGGCAGGAGTATGAAATGCGTAGGATGAAGCAGGCAAGTGACTTTTCGGATCAAGGTTTGGAAGTGATCTCAGAAGGATTGGATACATTGAAAGACATGGCACATGATATGAATGAGGAACTGGATAGACAAGTCCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCAGCCTCTGATCTTAAGAATACAAATGTCAGACTTAAAGACACAATCAATCAGCTTCGATCCAGTCGAAACTTCTGCATTGATATTGTGTTGTTGATTATAATTCTGGGAATTGCTGCCTATTTATACTTATGTTTGCATCAAGGTATGAGGGGATGGGGATTGGTGTTAACAGCAAGCCAGCCTTTTGTATTTTTTGTGGGTGTTCTATCTAGAAGATCAGACCCATTACATTTGAAATCTCTTTAG 1161 0.4488 MTEILIMQVKPASLISATWFLYFVLKFSGEGITVPRYLVLTATNGIRNFTAIGNVDVDVPIPQGYTESCDKDQDWISVPSNTMSVIDLLTRVDSICKKYDKYDIDKHKDSNVSGDDAFARLYAVVDADIEAALQKAETASKEKSRASTVAINAELRRTKARLLEEVPKLQRLAVKKVKGLQPEEFAARNDLVLALPDRIQAIPDGAPAAPKQTGGWAASASRTEIKFDSDGQFDNEYFQQTEESSGFRQEYEMRRMKQASDFSDQGLEVISEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTINQLRSSRNFCIDIVLLIIILGIAAYLYLCLHQGMRGWGLVLTASQPFVFFVGVLSRRSDPLHLKSL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0637 386 SUPERFAMILY SNARE fusion complex 262 317 - -
Lele16g0637 386 PANTHER SYNTAXIN 127 339 IPR045242 -
Lele16g0637 386 Coils Coil 306 326 - -
Lele16g0637 386 Pfam SNARE domain 294 343 IPR000727 -
Lele16g0637 386 Coils Coil 152 172 - -
Lele16g0637 386 SMART tSNARE_6 252 319 IPR000727 -
Lele16g0637 386 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 257 319 IPR000727 -
Lele16g0637 386 CDD SNARE_Qc 264 317 - -
Lele16g0637 386 FunFam Putative syntaxin-71-like 252 318 - -
Lele16g0637 386 Gene3D - 255 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0637 Lele-ChrLele16 3547219 3553673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0637 83 351 SNARE and Associated Proteins AT3G09740 73.063 6.96e-144 407