Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0622 ATGGGGTCATTAGAAAGATCAAAGAAGGGAATTCATTTGTGGAAGAAAGCCATGATCCACTTCTCTCTATGTTTTGTGATGGGGTTCTTCACAGGCTTTGCTCCAACAGGTAAATCTTCTTTCGTGTCAACAAAAGCAACTTCTGCCTCCAATGGAACAGAATTTGCCCCACAAGCTATTGAAATGTCGCACGACCAGACAACAAATGTCAATGGAAGTTTGATATCTCCAAGTTCTAGGATCCCCAAACACAAGACAGAGTCACATGTACAAGAAGAGCCGAGTTTGAAGCCTAGAAAACACATAATCGTTGTCACTCCAACGAGCAACAAAATTCCCTTTCAAGCAGTGTTATTGAGGAGGTTGGCGAATACTATAAAGTTGGTTCCTCAGCCGTTGTTGTGGATTGTGGTGGAACCACCAATGGAGTCCACTGAACTTCCGGAGATACTAAGGAAAACAGGAATCATGTACAGACATTTGGTGTCCAAGGAAAACTTCACAGACCTGGAAGCTCAGCTGAATCATCAGAGAAATCTTGCTCTCAAGCACATCGAACACCATAAGCTAAGTGGGATTGTTCACTTTGCTGGGCTTTCCAATGCTTATGATCTCGAATTCTTCCACCAGCTTAGAGATATTGAGGTATTTGGAACATGGCCAGTGGCGCTATTAGCAGCAAACAGGAAGAAAGTAATAATACAAGGGCCAGTTTGTGATTCTTCACAAGTCATAGGTTGGCATCTGAAGAATATCAACAATAATGAATCTGTTTCTACCACTCCTCTCCTTCACATTTCAAGTTTTGCATTCAATAGTTCCATTCTTTGGGACCCTGAACGGTGGGGTCGCACTTCTTCTGTTCAAGACACGTCTCAGAATTCAATCAAAATTGTGAAGCAAGTGGTATTAGAGGATGAATCGAAGTTAAATGGGTTTCCGCCAGAGGGATGCTCCAGAATCATGCTATGGCGTTTCAATTTTCGACCTCCTCTCACTCCAAGATATCAAATCTTAGCTTCTACGCCAAATGAAGACAAGCTTGCTGGCACAAGAAGAAAAGGACTTCAAATAGAAATTTACCTCCTGCTCTCAAACGGGCTCTGCATAGTAATGCGAGCAGCTTGTGGAAAGGAATGGAGTGCAATTATTGCTCGGAAACCGACTGTAGCTTGCAGCTTCACACTAGCCGGGGGAAGAAGAAGAAGATATTTGAGATCTGCCATTTTTGTGGTTCAGTTCAGGAGCCAATTGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGCCCTGACTCAAAGAAGAGGGAAGACGAGAGATCAAATAAATCAAAGAAGAAATGGTTTGGAAAGCAAAAATTGCAGACTTCAGACTCATACTTGGAAACTGACAATGCTCCACCTCTTCCTCCACCAGAAGAGGTCAAATTAACTAATACTGAGAGTGAAAACAATCATGCTCCCGATGTCAAAGTTGCGACCGCTGCAGATATTGAGGAGCCTGTTCCTGCTGTTCAAACAGCCCCTGTTCCAGTTCAAGCCGCTATAATTCCTCAGTCTTCTAGGAAATTAAGTACTGAAGTAGCAGCAATTAAGATTCAAACAGCTTTTCGAGGATACTTGGCAAGAAGAGCATTACGGGCTTTAAGAGGCTTGGTTAGGTTGAAATCTCTGATGGAAGGGCCAATTGTAAAACGCCAAGCTGCTAGTACTCTTCGCTCGATGCAGGCTCTAGCTCGTGTGCAATCTCAGATACAATCTAGGAGGATCAGAATGCTAGAGGAGAATCAAGCTATTCAGAGACAGTTCTTACAGAAGCATGCAAAAGAGCTTAGCCTTCAGATGGGAGATGAATGGGATGACAGCCTGCAATCAAAGGATCAAATTGAAGCCAAGTTACTGAGCAAGTACGAGGCCACAGTGAGGAGAGAAAGATCACTGGCTTATGCATTTTCTCACCAGCAAAATGGGAAGAATTCATCTAGATCTATAAATCCTGTATTTATGGATCCAACCAACCCGGCATGGGGTTGGAGCTGGCTGGAGCGATGGATGGCAGCCCGGCCCTGGGAGAGCAAAGATGTGAATGACCAGTCATCGGTCAAAAGCTCGAGCCGCAGCATCACTGGTGGAGAAATAAGTAAATCCTATGCTCGTTACCAGCTCAATTCTGAAAAACACTCTCCAACGGCCAGCCAAAACCTAGGTTCCCCTGGCTTTCACTTCCACACAACTCCTTCCAAGGCACTTGCTTCTTCAGCATCAGTTGGCAAAAAACTGAAGAAAGTGAGCCCCAAGGAAACCTCGGTTATCGATGATGACTCTAAAAGCATGGTTAGCGTGCAGTCCAGTTTTCGGAGGCACTCCATTGCTGGATCATCTGCGAGAGATGATGAGAGCCTCACAGGCTCTCTGGCCGTTCCAAGCTACATGGTGCCAACTCAGTCTGCAAAAGCCAAGTCCAAGACAATCAGTCCATTAGCAGTAGAGAATGAAACAGTAGAGAAGGGATCCTCTGGGACAGCGAAGAAACGGCTTTCCTTCCCTCCTTCACCGGCAAGGCCAAGACGGCATTCAGTTCCACCAAAGGTAGAAAGCAGCTTCAATGCAGAGGTCAACGTGGGTAATGGTGTGGCTGGTTGA 2670 0.4506 MGSLERSKKGIHLWKKAMIHFSLCFVMGFFTGFAPTGKSSFVSTKATSASNGTEFAPQAIEMSHDQTTNVNGSLISPSSRIPKHKTESHVQEEPSLKPRKHIIVVTPTSNKIPFQAVLLRRLANTIKLVPQPLLWIVVEPPMESTELPEILRKTGIMYRHLVSKENFTDLEAQLNHQRNLALKHIEHHKLSGIVHFAGLSNAYDLEFFHQLRDIEVFGTWPVALLAANRKKVIIQGPVCDSSQVIGWHLKNINNNESVSTTPLLHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKIVKQVVLEDESKLNGFPPEGCSRIMLWRFNFRPPLTPRYQILASTPNEDKLAGTRRKGLQIEIYLLLSNGLCIVMRAACGKEWSAIIARKPTVACSFTLAGGRRRRYLRSAIFVVQFRSQLRNAKKMGRKGNWFSSVKKALSPDSKKREDERSNKSKKKWFGKQKLQTSDSYLETDNAPPLPPPEEVKLTNTESENNHAPDVKVATAADIEEPVPAVQTAPVPVQAAIIPQSSRKLSTEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPIVKRQAASTLRSMQALARVQSQIQSRRIRMLEENQAIQRQFLQKHAKELSLQMGDEWDDSLQSKDQIEAKLLSKYEATVRRERSLAYAFSHQQNGKNSSRSINPVFMDPTNPAWGWSWLERWMAARPWESKDVNDQSSVKSSSRSITGGEISKSYARYQLNSEKHSPTASQNLGSPGFHFHTTPSKALASSASVGKKLKKVSPKETSVIDDDSKSMVSVQSSFRRHSIAGSSARDDESLTGSLAVPSYMVPTQSAKAKSKTISPLAVENETVEKGSSGTAKKRLSFPPSPARPRRHSVPPKVESSFNAEVNVGNGVAG 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0622 889 Pfam Glycosyltransferase family 43 122 327 IPR005027 GO:0015018|GO:0016020
Lele16g0622 889 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 334 IPR005027 GO:0015018|GO:0016020
Lele16g0622 889 MobiDBLite consensus disorder prediction 438 454 - -
Lele16g0622 889 SMART iq_5 534 556 IPR000048 GO:0005515
Lele16g0622 889 Gene3D - 526 560 - -
Lele16g0622 889 MobiDBLite consensus disorder prediction 435 495 - -
Lele16g0622 889 MobiDBLite consensus disorder prediction 828 845 - -
Lele16g0622 889 CDD GlcAT-I 102 330 IPR005027 GO:0015018|GO:0016020
Lele16g0622 889 Pfam IQ calmodulin-binding motif 538 556 IPR000048 GO:0005515
Lele16g0622 889 MobiDBLite consensus disorder prediction 74 93 - -
Lele16g0622 889 MobiDBLite consensus disorder prediction 828 889 - -
Lele16g0622 889 MobiDBLite consensus disorder prediction 733 753 - -
Lele16g0622 889 FunFam Glycosyltransferases 100 339 - -
Lele16g0622 889 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 101 346 IPR029044 -
Lele16g0622 889 SUPERFAMILY Nucleotide-diphospho-sugar transferases 101 339 IPR029044 -
Lele16g0622 889 ProSiteProfiles IQ motif profile. 535 563 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0622 Lele-ChrLele16 3483575 3491295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0622 1 328 Glycosyltransferase AT2G37090 59.130 1.94e-137 411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1097 06 6822036 6826112 Lele16g0622 16 3483575 3491295 CCT
Lele07g1278 07 7740589 7743343 Lele16g0622 16 3483575 3491295 CCT
Lele08g1084 08 6840740 6842545 Lele16g0622 16 3483575 3491295 CCT
Lele05g1231 05 7704496 7706363 Lele16g0622 16 3483575 3491295 CCT
Lele14g1743 14 24546908 24553098 Lele16g0622 16 3483575 3491295 hybridization