Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0618 ATGTACGGAACTCCGTTAGAGAGGCACATAGTTGGATATGGCTCCTTGAATCCAAGTGGTTTCATGGATGTAGTGGGCATTTATTTTCCTCAGCCGCTTTTCGCAGTCGAACAAAGCTGGCTCGACCTCACGTCTGCTCTCATCTCTTTCTTTTCTTCTCCGTCGGGTCAAAACCTAACTTCCCAGGTTCTTATTGTCGTATGGGAGAGTGATCAACTTGAGGATGGTGCAAAAGTAGACATCCGACTGCATAACTGTCCTGAAACTATGATCGCTCTGAAAAACTTAAAAGCAGCATATATTGGAAAACGACAGAGTATAACATTTGGTGAATTGACAGACAAACTTGTCTCAGTGCGTGGAACTGTTGTGAAGGCCAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGTTTTGAATCGGAAAGTGCAAAGAAAGAATTAGGCGTATATTTCCTGATACCGCCATCAATTGGCAATTTGAAGGGCTGCAAGAGCAAAATATTTAACCCATTACGATGTACAGCTCGAGCTATAGATTTTCAAAAAATAAGGTTGCAAGAACTCCTAAAACCCGAAGATCATGAAGAAGGACGAGTTCCTCGGACAGTGGAATGTGAGCTTATCCAGGATCTCATTGATACATGCATACGTGGAGATGTGTTGACTGTCACTGGAATTATAAGAGGAACTAACACGTACATGGATATTGGAGGAGGAAAGTCAAAGAACAGAAGCCAGGGATTTCACTATTTGTATCTCGAAGCCGTCTCTATACAAAATTCCAAGTCACAGTCTACAAATGAGGATTTGCAAGACACTAATCCCAAAGCAAGACCAGCTGAGCTGCTTGATTTGTTTTCATTTTCTTCCAGGGATTTAGAGTTTATTGTGAAATTTTCAATGGAGCATGGCTCAGATTTGTTTCGGCGAATACTTCAATCTATACGCCCATCTATCTATGGGCATGAGCTTGTTAAAGGTGATCTTGGACTAGGCAAGAGCCAATTGCTACAGGCAGTAGCTTCTGTTTCTCCACGAGGCATCTATGTCTGCGGTAATGCGACAACTAAAGCCGGCCTCACAGTAGCTGTAGGAAAGGATCCTATGACGAGTGACTGTGCTTTTGAGGCCGGTATACGTTCTTCTTCTTTCAGTCCTAATCAGCAAGACCCTTATCTTCGGGCTTTATGA 1191 0.4307 MYGTPLERHIVGYGSLNPSGFMDVVGIYFPQPLFAVEQSWLDLTSALISFFSSPSGQNLTSQVLIVVWESDQLEDGAKVDIRLHNCPETMIALKNLKAAYIGKRQSITFGELTDKLVSVRGTVVKASTVRPLVVEMSFESESAKKELGVYFLIPPSIGNLKGCKSKIFNPLRCTARAIDFQKIRLQELLKPEDHEEGRVPRTVECELIQDLIDTCIRGDVLTVTGIIRGTNTYMDIGGGKSKNRSQGFHYLYLEAVSIQNSKSQSTNEDLQDTNPKARPAELLDLFSFSSRDLEFIVKFSMEHGSDLFRRILQSIRPSIYGHELVKGDLGLGKSQLLQAVASVSPRGIYVCGNATTKAGLTVAVGKDPMTSDCAFEAGIRSSSFSPNQQDPYLRAL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0618 396 Pfam MCM OB domain 113 229 IPR033762 -
Lele16g0618 396 Pfam MCM P-loop domain 324 378 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele16g0618 396 SMART mcm 105 396 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele16g0618 396 ProSiteProfiles MCM family domain profile. 324 378 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele16g0618 396 Gene3D - 285 382 IPR027417 -
Lele16g0618 396 Gene3D - 110 263 IPR012340 -
Lele16g0618 396 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 327 378 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele16g0618 396 SUPERFAMILY Nucleic acid-binding proteins 81 229 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0618 Lele-ChrLele16 3470405 3473296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0618 42 378 Core DNA Replication Machinery Family AT3G09660 53.439 1.92e-128 387