Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0608 ATGGCGATCGACCTTCATATGATGGATACAACTGGAGAAAATATGGGCAGAAGCAAGTTAGAGGAAGTGAGTACCCTAGGAGTTACTATAAATGCACATATCTTAATCGCCCAGCCAAGAAGAAGGTGGAAAGATCTCTCGATGGCCAGATTGCAGAAATATTTACTGTATTCTGTATTTAATTGCTGTTGTTTCCGGAAAAATGAGAGTAAATCCAATGACACAGCAGTTTCAGAGAGTGCAGAACCTGGAGAAGATGGCTTCCGGTGGAGAAAATATGGGCAGAAGGTTGTGAAGGGCAATCCATATCCCAGGTTTGATATTTGA 327 0.419 MAIDLHMMDTTGENMGRSKLEEVSTLGVTINAHILIAQPRRRWKDLSMARLQKYLLYSVFNCCCFRKNESKSNDTAVSESAEPGEDGFRWRKYGQKVVKGNPYPRFDI 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0608 108 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 79 105 IPR044810 GO:0003700
Lele16g0608 108 Pfam WRKY DNA -binding domain 85 105 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0608 108 Gene3D WRKY domain 73 107 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g0608 108 ProSiteProfiles WRKY domain profile. 79 108 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0608 108 SUPERFAMILY WRKY DNA-binding domain 81 105 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0608 Lele-ChrLele16 3417289 3417850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0608 66 105 WRKY Transcription Factor Family AT2G37260 60.465 5.21e-10 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g0608 WRKY 2.1e-07 CL0274