Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0606 ATGGGTTGGATTCCATGTTCTGGAAATCTAAACGGCAAGAAAAAGGGAAAAAATAAGATAAAGAAGACGGAAGTGCAGGAGAATACGGTAGATCAAACCAAACCAACTCCAGGGAAGTTGAAGAGGAACTCATCCACTAGTTCCAAAGATCCCTCTAAAAATGGGAATTCTGATCACATTGCGGCTCAGACTTTCATATTCCGTGAGTTGGCGACAGCAACTAGAAATTTTAGGACAGAAAGTCTTTTAGGAGAGGGAGGATTTGGTAGGGTATACAAAGGGCGTTTGGAAAGTTCTAATCAGGTTGTCGCGATAAAGCAACTTGACCGAGATGGTTTGCAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGCTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATACATGCCATTAGGATCCTTGGAAGACCACTTATATGATATTTCTCCTGTCAAAAAACGGCTCGATTGGAACACGCGAATGAAAATTGCTGCTGGAGCAGCAAAGGGATTGGAATATCTGCATGACAAAGCGAACCCTCCCGTCATATACCGAGATTTAAAGTGTTCAAACATTTTGCTTGGGGAAGGGTATCATCCAAAGTTATCTGATTTTGGTTTGGCTAAACTTGGGCCTGTTGGGGAAAACACCCATGTATCCACAAGGGTTATGGGTACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACACTGAAATCTGATGTTTATAGCTTTGGCATAGTTCTTCTGGAAATAATCACAGGAAGGAAAGCCATTGACAGCTCAAAAGCTGCGGAAGAGCAGAATCTCGTTGCATGGGCAAGACCCTTGTTTAAGGATCGAAGAAAATTTTCACAAATGGCTGATCCAATGCTTCAAGGTCAGTATCCTCCCAGAGGCTTATATCAAGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAAGCAAATATGCGGCCAGTTATAGCTGATGTCGTCACTGCCTTGTCTTACCTTGCTTCCCAAATGTATGATGGCAATTCACACTCTCTTCAAAGCCCTCGCCATGCCCCTGCTACTCCTACAACCAGGAGAGGAAGATGA 1149 0.4334 MGWIPCSGNLNGKKKGKNKIKKTEVQENTVDQTKPTPGKLKRNSSTSSKDPSKNGNSDHIAAQTFIFRELATATRNFRTESLLGEGGFGRVYKGRLESSNQVVAIKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLYDISPVKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGIVLLEIITGRKAIDSSKAAEEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQMYDGNSHSLQSPRHAPATPTTRRGR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0606 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Lele16g0606 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Lele16g0606 382 MobiDBLite consensus disorder prediction 1 58 - -
Lele16g0606 382 SUPERFAMILY Protein kinase-like (PK-like) 61 349 IPR011009 -
Lele16g0606 382 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
Lele16g0606 382 MobiDBLite consensus disorder prediction 362 382 - -
Lele16g0606 382 Pfam Protein tyrosine and serine/threonine kinase 80 349 IPR001245 GO:0004672|GO:0006468
Lele16g0606 382 Gene3D Phosphorylase Kinase; domain 1 47 153 - -
Lele16g0606 382 PANTHER OS07G0668900 PROTEIN 24 363 - -
Lele16g0606 382 Gene3D Transferase(Phosphotransferase) domain 1 154 369 - -
Lele16g0606 382 MobiDBLite consensus disorder prediction 29 58 - -
Lele16g0606 382 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Lele16g0606 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0606 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0606 382 CDD STKc_IRAK 83 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0606 Lele-ChrLele16 3412929 3415467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0606 31 356 Glycoside Hydrolase AT3G07070 65.951 1.36e-162 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele16g0606 PK_Tyr_Ser-Thr 4.5e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1122 06 6989084 6993711 Lele16g0606 16 3412929 3415467 CCT
Lele07g1304 07 7909996 7911856 Lele16g0606 16 3412929 3415467 CCT
Lele08g1109 08 6981271 6989146 Lele16g0606 16 3412929 3415467 CCT
Lele13g1814 13 26236224 26238679 Lele16g0606 16 3412929 3415467 hybridization
Lele14g1757 14 24626143 24628679 Lele16g0606 16 3412929 3415467 hybridization