Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0602 ATGGTGAAGTCATGCTGGAAACCATCCGTGGAGGGTGAAGATGGAGAAGGGAGTGGGAAGCTTGGTGGATTGCTATGGCATAAGGATTTAGGCAATCATGTGTATGGAGATTTCTCAATGGCTGTAGTTCAGGCCAATACTTCATTGGAGGATCGAAGTCAGCTCGAATCTGGACCCTTCACTTCCAGTAATGATACTCAGGGCACCTTCATCGGTGTCTACGACGGTCATGGCGGATTCGAGGCCTCCCAGTTCGTCACCGACAATCTCTTCTCCAATCTCAAGAGACTTGCAGGTGAAGAAGGAGGCATGTCAGAGAGTGTTATAAAGAGGGCATATTCTGCAACAGACGAAGGATTTCTGTCTATGGTGAAGAGGAAGTGGATGAGCAAACCAGAGATTGCATCCACAGGGACGTGTTGTTTGGTGGGGATAATCTGTAATGGGATGATATATATCGCAAATTCTGGAGATTCTCGAGTGGTTCTGGGAAGAATGGAGAGGGCAATGAAAGAAGTTGCAGCTATTCAACTATCTGCAGAACACAATGTTAACATAGAATCCGTAAGAGATGAAGTTCGATCAAAGCACCCCTTTGATTCACAGATTGTGGTCGTCAAACAACAAGTTTGGCGCGTCAAAGGCCTCATTCAGGTTTCGAGGTCCATAGGCGATGCATATCTGAAGAAGGCAGAATTTAACAGAGAGCCTCTGCCATTGAGGTTTAGATTGGCGGAACCCTTCTTCAAGCCTATTCTGAGCTGTGAGCCGTCGATATCAACGCAGAAACTCCATCCTGACGATCAGTTTCTGATATTTGCATCAGACGGCTTGTGGGAGCACCTTAGCAACCAAGAAGCTGTGAACATAGTCAGCAACAACCCACGTAATGGAATAGCGAGGAGGCTGGTGAAAGCAGCCATAAGAGAAGCAGCGAAGAAGAGGGAAATGAGTCTGCAAGAGCTGGAGAAGATGGAAGCAGGAGTGAGGAGGCACTTCCATGATGACATAACAGTAATAGTTGTGTTTCTGAACCCCAAACTCACTGAGAATAACTCTCCATTGGGTTCTCCTCTTTCAATCAAAGCAGGTTGGCCTGCCAATCCATAG 1110 0.4676 MVKSCWKPSVEGEDGEGSGKLGGLLWHKDLGNHVYGDFSMAVVQANTSLEDRSQLESGPFTSSNDTQGTFIGVYDGHGGFEASQFVTDNLFSNLKRLAGEEGGMSESVIKRAYSATDEGFLSMVKRKWMSKPEIASTGTCCLVGIICNGMIYIANSGDSRVVLGRMERAMKEVAAIQLSAEHNVNIESVRDEVRSKHPFDSQIVVVKQQVWRVKGLIQVSRSIGDAYLKKAEFNREPLPLRFRLAEPFFKPILSCEPSISTQKLHPDDQFLIFASDGLWEHLSNQEAVNIVSNNPRNGIARRLVKAAIREAAKKREMSLQELEKMEAGVRRHFHDDITVIVVFLNPKLTENNSPLGSPLSIKAGWPANP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0602 369 SUPERFAMILY PP2C-like 46 345 IPR036457 -
Lele16g0602 369 SMART PP2C_4 31 342 IPR001932 -
Lele16g0602 369 Gene3D - 27 353 IPR036457 -
Lele16g0602 369 PANTHER PROTEIN PHOSPHATASE 28 342 - -
Lele16g0602 369 FunFam Phosphatase 2C family protein 26 354 - -
Lele16g0602 369 CDD PP2Cc 35 344 IPR001932 -
Lele16g0602 369 ProSitePatterns PPM-type phosphatase domain signature. 70 78 IPR000222 GO:0043169
Lele16g0602 369 ProSiteProfiles PPM-type phosphatase domain profile. 37 344 IPR001932 -
Lele16g0602 369 Pfam Protein phosphatase 2C 47 313 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0602 Lele-ChrLele16 3391572 3392937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0602 1 364 PP2C-type Phosphatase Gene Family AT3G12620 63.043 6.89e-173 485