Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0595 ATGGGTAAAGGAGGCCAAAACTACGGCAAACGAGAGAATATCGGTTCCAATTCTTCGGGTGGGGACACCTTCAAGGCCTGGGCTGAAGATGTGCAGGGATGCGAGGATTTTTATAAGGTGAAGGTCAAAGCGGGTTTAAGTTCCGATGAGGTTGAGAACCGCCGCCGGATCCATGGTTCGAATGAGTTGGAGAAGCACGAGGGCCAGTCGATCTGGAGTCTGATCCTTGAGCAGTTCAACGACACATTGGTTCGAATTCTGCTTGCCGCTGCCATCATCTCCTTTGTGCTGGCTTGGATAGATGGCGAGGAAGGCGGAGAGAAGGAGATTACAGCGTTTGTGGAGCCTTTGGTGATATTTCTGATATTGATTGTGAATGCAGCCGTGGGAGTATGGCAAGAGAGCAACGCGGAGAAGGCACTCGAAGCGTTGAAGGAGATTCAGTCAGAGCACGCGACCGTGATTCGTGATGGTAAGAAAGTTCCAAACATGCTGGCGAAGGATCTCGTGCCCGGTGATATCGTTGAGCTCAAGGTTGGGGACAAGGTACCGGCTGATATGAGGGTTGTGGAATTGATTAGCTCTACTTTACGAGTGGAGCAGGGTTCATTGACAGGAGAGAGTGAAGCTGTGAATAAGAACAACAAGGCTGTTCCCGAGGATTCTGATATTCAAGGCAAGAAATGTATAGTTTTTGCAGGGACAACCGTTGTTAACGGGAATTGCATTTGCTTGGTTACTCAGACGGGCATGGAAACAGAGATTGGAAAGGTGCACCGGCAGATTCATGTGGCATCGCAGAGTGAGGAGGATACCCCATTGAAGAAGAAGCTCAATGAGTTTGGAGAGATGCTAACTATTATAATTGGAATAATATGTGCTTTTGTATGGCTCATCAATGTTAAGTACTTCCTTTCATGGGAAATTGTGGAAGGGTGGCCTAGGAACTTTAAGTTTTCTTTTGAGAAGTGTACATATTACTTTGAGATTGCTGTGGCATTGGCTGTTGCCGCGATTCCAGAAGGTCTGCCTGCAGTCATTACAACTTGCCTGGCACTAGGTACTCGTAAGATGGCTCAGAAGAATGCTTTTGTTCGAAAACTGCCAAGTGTAGAGACATTGGGTTGTACAACTGTGATATGTTCAGATAAAACGGGTACATTGACAACAAACCAGATGGCAGCAGCTAAGCTTGTAGCTATGGGTCCTAATGTAGATATGCTGCGAGCCTTCAAGGTGGAAGGAACTACTTACAATCCATCCGATGGTAGAATAGAGGACTGGCCAACAGGTCGAATGGATGCTAATCTTGAGGTGATAGCAAAAATAGCTGCTGTCTGTAATGACGCTGAAGTCTCACAGTCAGAGCATAAATTTGTGGCTCATGGAATGCCCACGGAAGCAGCCTTGAAGGTTTTGGTGGAGAAGATGGGTCTTCCTGAAGAAGCCCGAGATATAAGAGCAGCGAGTGCAAGTACCATACTACGTTGTTGTAACTGGTGGATTAAACATGACCAGCGGATTGCTACTCTTGAGTTTGACCGTGATAGGAAGTCAATGGGTGTCGTTGTGAACTCCTCTCAGGGGAAAAAGTCACTGCTGGTGAAGGGTGCGGTGGAAAATTTGTTGGAAAGAAGCTCTAAAGTTCAGCTGCGCGATGGTTCTGTTGTGAAACTTGATGATAATGCCAAGAACCTTATCTTGCAAGCTCTTCATGAAATGTCAACTAGTGCATTACGCTGTTTAGGTTTTGCATACAAGGATGATCTCCCAATGTTTGAAAACTACTCTGGTAATGATGATCATCCAGCACACCAGCTCTTGCTTGACCCATCCAACTATCCATCTATTGAGAGTGAACTTATATTTGCTGGCTTGGTCGGGTTGAGGGATCCTCCTAGAGAGGAAGTACACCAAGCAATTGAGGACTGCAGATCTGCTGGAATTCGTATTATGGTAATTACTGGGGATAACAAGAACACTGCAGAAGCTATATGCCGTGAAATAGGTGTATTTGGAACCAATGAAGACATTAGTTTGAAAAGTATAACTGGGAAAGATTTTATGGAGCTACGTGATAAAAAGTCCTATCTGAGACAAAGTGGTCGGCTTTTGTTTTCAAGGGCTGAACCAGGTCACAAACAGGAGATAGTGAAGCTTCTCAAGGAGGAAGGCGAGGTGGTTGCCATGACTGGAGATGGTGTGAATGACGCGCCTGCCTTGAAGCTTGCTGATATTGGCATTGCAATGGGCATTGCAGGGACAGAGGTGGCAAAGGAAGCCTCGGATATGGTGTTGGCAGATGATAATTTTAGTACAATAGTTGCTGCTGTTGGTGAAGGCAGATCTATCTACAATAACATGAAGGCTTTTATCAGGTACATGATTTCTTCAAATATTGGCGAGGTTGTCTCCATATTTTTAACGGCTGCATTAGGTATTCCTGAAGGACTGATACCTGTTCAGCTGCTGTGGGTCAATCTCGTCACGGATGGACCCCCTGCTACAGCTTTGGGATTCAACCCACCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGTAGTGATGATTCACTAATTAATGCATGGATTTTGTTCCGTTATCTGGTTATTGGGTTGTATGTTGGGTGTGCTACAGTTGGTATCTTCATTATATGGTATACTCACGGTTCTTTCTTAGGCATAGACCTTACCCAGGATAACCATTCGCTTGTCACTTATTCACAACTAGCCAACTGGGGCCAATGCTCCACTTGGAAGAACTTCACTGCTTCTCCGTTCGCAGCTGGTGATAAGGAAATTTCTTTTGGCGATTCCCCCTGTGACTACTTCAAAACTGGAAAAGTGAAAGCCATGACGCTGTCCCTCTCAGTGCTGGTAGCCATCGAGATGTTCAATTCCCTTAACGCCCTTTCTGAGGATGGAAGCCTCTTGTCGATGCCCCCTTGGAAAAATCCTTGGCTTCTCTTGGCAATGTCTGTGTCATTTGGTCTGCACTTCTTGATATTGTACGTGCCATTCTTAGCACAAATATTTGGCATCGTGCCCCTCACCTTGAATGAGTGGCTTTTGGTCTTGGTCGTTGCTTTCCCTGTCATACTAATTGACGAGGTTCTGAAATTTGTGGCGAGGTGTACAAGCAGCTCCCAAACTTCGAAAGCGAAGGCGAAAACAGAGTAG 3180 0.4575 MGKGGQNYGKRENIGSNSSGGDTFKAWAEDVQGCEDFYKVKVKAGLSSDEVENRRRIHGSNELEKHEGQSIWSLILEQFNDTLVRILLAAAIISFVLAWIDGEEGGEKEITAFVEPLVIFLILIVNAAVGVWQESNAEKALEALKEIQSEHATVIRDGKKVPNMLAKDLVPGDIVELKVGDKVPADMRVVELISSTLRVEQGSLTGESEAVNKNNKAVPEDSDIQGKKCIVFAGTTVVNGNCICLVTQTGMETEIGKVHRQIHVASQSEEDTPLKKKLNEFGEMLTIIIGIICAFVWLINVKYFLSWEIVEGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAFVRKLPSVETLGCTTVICSDKTGTLTTNQMAAAKLVAMGPNVDMLRAFKVEGTTYNPSDGRIEDWPTGRMDANLEVIAKIAAVCNDAEVSQSEHKFVAHGMPTEAALKVLVEKMGLPEEARDIRAASASTILRCCNWWIKHDQRIATLEFDRDRKSMGVVVNSSQGKKSLLVKGAVENLLERSSKVQLRDGSVVKLDDNAKNLILQALHEMSTSALRCLGFAYKDDLPMFENYSGNDDHPAHQLLLDPSNYPSIESELIFAGLVGLRDPPREEVHQAIEDCRSAGIRIMVITGDNKNTAEAICREIGVFGTNEDISLKSITGKDFMELRDKKSYLRQSGRLLFSRAEPGHKQEIVKLLKEEGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVVSIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINAWILFRYLVIGLYVGCATVGIFIIWYTHGSFLGIDLTQDNHSLVTYSQLANWGQCSTWKNFTASPFAAGDKEISFGDSPCDYFKTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLSMPPWKNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLTLNEWLLVLVVAFPVILIDEVLKFVARCTSSSQTSKAKAKTE 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0595 1059 FunFam Calcium-transporting ATPase, putative 123 263 - -
Lele16g0595 1059 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 238 402 - -
Lele16g0595 1059 SUPERFAMILY HAD-like 622 835 IPR036412 -
Lele16g0595 1059 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Lele16g0595 1059 PRINTS P-type cation-transporting ATPase superfamily signature 647 657 - -
Lele16g0595 1059 PRINTS P-type cation-transporting ATPase superfamily signature 731 750 - -
Lele16g0595 1059 PRINTS P-type cation-transporting ATPase superfamily signature 755 767 - -
Lele16g0595 1059 PRINTS P-type cation-transporting ATPase superfamily signature 625 636 - -
Lele16g0595 1059 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Lele16g0595 1059 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 1045 IPR023298 -
Lele16g0595 1059 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Lele16g0595 1059 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 391 632 - -
Lele16g0595 1059 Pfam haloacid dehalogenase-like hydrolase 378 745 - -
Lele16g0595 1059 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 795 1049 - -
Lele16g0595 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 320 400 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele16g0595 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 118 308 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele16g0595 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 705 812 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele16g0595 1059 SFLD p-type atpase 362 783 IPR044492 -
Lele16g0595 1059 SFLD Haloacid Dehalogenase 362 783 - -
Lele16g0595 1059 FunFam Calcium-transporting P-type ATPase, putative 626 776 - -
Lele16g0595 1059 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 629 IPR023299 GO:0000166
Lele16g0595 1059 Pfam Cation transporting ATPase, C-terminus 816 1042 IPR006068 -
Lele16g0595 1059 Gene3D - 391 632 IPR023299 GO:0000166
Lele16g0595 1059 SUPERFAMILY Calcium ATPase, transduction domain A 149 261 IPR008250 -
Lele16g0595 1059 Pfam E1-E2 ATPase 147 361 - -
Lele16g0595 1059 Pfam Cation transporter/ATPase, N-terminus 28 94 IPR004014 -
Lele16g0595 1059 Gene3D - 77 1044 - -
Lele16g0595 1059 PANTHER CALCIUM-TRANSPORTING ATPASE 27 1051 - -
Lele16g0595 1059 Gene3D - 45 265 - -
Lele16g0595 1059 Gene3D - 378 776 IPR023214 -
Lele16g0595 1059 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Lele16g0595 1059 PRINTS Sodium/potassium-transporting ATPase signature 374 395 - -
Lele16g0595 1059 PRINTS Sodium/potassium-transporting ATPase signature 984 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0595 Lele-ChrLele16 3352079 3357272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0595 1 1059 Primary Pumps ATPases(2) AT1G07670 77.611 0.0 1693