Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele16g0585 | ATGGGGAATTCAGTCGGCCATCGCAAACACCGTAACTCCTCTCCTCACTACCCCACACCTCCCTCCTATATATATGCTTCTCCGCCTCACCTTCCAACCCCAATTTCAGCTGCTCCCTCTCACGGGCACTTCGCCGCCGGAATGCTCCCTTTACCTTATTCCCACGTCGACTCCAGTCTGCGTGCTCTCGCCGCCCAAGCTGAAGGCTTTGGTCGATGTGCGATCGGTGGGCTTCATGGTCCCCTTTATCACGTTACAACTTTAGCAGATGATGGACCAGGATCACTCCGCGATGGTTGTCGCAGAAAAGAACCATTGTGGATTGTATTTGAGGTTTCTGGAACTATTCATCTTTCATCTTACTTGAGTGTGTCATCTTACAAGACTATTGATGGCCGTGGTCAAAGGATTAAACTCGCTGGAAAGGGTTTGCGGCTGAAGGAATGTGAACATGTAATAATTTGCAACTTAGAGTTAGAAGGTGGTAGAGGGCCTGATGTGGATGGCATTCAGATCAAGCCTAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGGGATTTTGATGATGGACTGATAGATATTACCCGAGAAAGCACTGATATTACTATTTCTAGATGTCATTTTGCTCAGCATGACAAAACGATGCTTATTGGAGCGGATTCCTTTCACATTGGTGATAGATGCATGAGGGTGACTATTCACCATTGTTTCTTTGATGGAACACGACAGCGACACCCTCGTGTTAGATTTGCAAAAGTGCATCTGTACAATAATTACACCAGAAATTGGGGCATATATGCTGTTTGTGCGAGTGTGGAATCACAGATATACTCACAATGCAACATCTATGAAGCAGGGCAAAAGAAAGTAGCATTTAAGTATCTCTCTGAAAAGGCGGGAGACAAGGAGGCAGAAGCAAGTGGTCACATATGGTCTGAAGGAGACTTGTTCATAAGTGGAACTCAGGCAGGCTTAAAGAGTGATAGCATGGGAGCTCCCACATTTCATCCAAGTCAACACTATACAACGTGGACAGTGGCACCTCCTACAGAAGATCTCAAACAGCTTCTTCATCACTGCACCGGATGGCAATGTGTTGCACGCCCACCAGATCGTCCCCTGCCTGCATAG | 1137 | 0.4679 | MGNSVGHRKHRNSSPHYPTPPSYIYASPPHLPTPISAAPSHGHFAAGMLPLPYSHVDSSLRALAAQAEGFGRCAIGGLHGPLYHVTTLADDGPGSLRDGCRRKEPLWIVFEVSGTIHLSSYLSVSSYKTIDGRGQRIKLAGKGLRLKECEHVIICNLELEGGRGPDVDGIQIKPNSKHIWIDRCSLRDFDDGLIDITRESTDITISRCHFAQHDKTMLIGADSFHIGDRCMRVTIHHCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLSEKAGDKEAEASGHIWSEGDLFISGTQAGLKSDSMGAPTFHPSQHYTTWTVAPPTEDLKQLLHHCTGWQCVARPPDRPLPA | 378 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele16g0585 | 378 | SMART | amb_all | 113 | 291 | IPR002022 | - | |
Lele16g0585 | 378 | PRINTS | Pollen allergen Amb family signature | 121 | 137 | IPR018082 | - | |
Lele16g0585 | 378 | PRINTS | Pollen allergen Amb family signature | 66 | 83 | IPR018082 | - | |
Lele16g0585 | 378 | PRINTS | Pollen allergen Amb family signature | 268 | 287 | IPR018082 | - | |
Lele16g0585 | 378 | Pfam | Pectate lyase | 122 | 284 | IPR002022 | - | |
Lele16g0585 | 378 | SUPERFAMILY | Pectin lyase-like | 66 | 368 | IPR011050 | - | |
Lele16g0585 | 378 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Lele16g0585 | 378 | Gene3D | - | 53 | 359 | IPR012334 | - | |
Lele16g0585 | 378 | PANTHER | PECTATE LYASE 18-RELATED | 55 | 330 | IPR045032 | GO:0030570 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele16g0585 | Lele-ChrLele16 | 3296173 | 3298771 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele16g0585 | 88 | 377 | Polysaccharide Lyase | AT3G55140 | 74.483 | 2.25e-167 | 468 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele16g0585 | 16 | 3296173 | 3298771 | Lele05g1264 | 05 | 7889815 | 7893118 | CCT | |
Lele16g0585 | 16 | 3296173 | 3298771 | Lele06g1129 | 06 | 7015490 | 7018668 | CCT | |
Lele16g0585 | 16 | 3296173 | 3298771 | Lele07g1310 | 07 | 7932259 | 7934672 | CCT | |
Lele13g1836 | 13 | 26362474 | 26365058 | Lele16g0585 | 16 | 3296173 | 3298771 | hybridization | |
Lele14g1782 | 14 | 24751685 | 24755144 | Lele16g0585 | 16 | 3296173 | 3298771 | hybridization |