Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0580 ATGCGTAAATGTGAGCGATACGATTTCTTGCCGATACGATTTCAACTTCAACCTAACAATTCATCATCTAAATTCGGGTGGAGATCTTCAAAACAACTGTTTGGTACTCCCATAAAAAAGTTACTAGCTGAAGAGATGTCGGGGGAAACTGACTCCAAAAGAAGATCTCCTAGTGTTATTGCCAGATTGATGGGTCTTGATGGGATGCCCCTTCAACAGCCTGCTAATAAGCAACATAAAAGTTCCTCTGAAGTCCATCTGCAGAGAAGACCACAGTTGGAGATAACTCATAGTGGCCGATCATCCAGGAGAAGCTCAAGGGATCAGCAAGAATTTAAAGATGTCTTTGAGGTCTCAGAGATCCCAAAGGCAGAGAGCTGTAGGTATCCATCGCAGGGTGCTGACTTGATTGCAACTGATGCTGAAATATCATTCATTGAACAGAAGTTCATGGATGCCAAACGTCTGGCAACTGACAGGGATTCACTCTCTTCAAAGGAATTTGATGATGCACTTGAGGTTCTGGACTCTAACACAGATCTTCTACTAAAATATTTTCAGCGGCCAGATTCGTTATTTAAGAAGCATCTAAATGATCTGCAAACTGCTCCACTTCAGTCACATTGTAAATACGTAGAAGCTATGACATCAACAGATAGGGAGAAGTATGAACAACATTATGACTTCAGCTGGAGGTCAACTCAGGACACAACCAGGTTGAATTGCAATAGATCTCATCAGAAGCGTCTTGATGGTTATCCTGCACAATTTGACAGAAGGCATGCTGTCCACAGTTCACCAAAATCACCAAAGCTTCAGTTGAGTGGAAAAGACAAACAAGATGCAATCCCCAGAAGGATTGTTGTCCTAAAACCCAATCTTGGAAAGGTGCAGAATTCTACAAAATGTCTTTCATCATCTTGTTCGTCACATGCTTTCTTATCAGAGAGTGGAAATAGTGCTGCATATCCAGAGGTCAGAAATAGTGGCCTTGAACTGCATAAGAGAAACCTTCCTGATACAGTGGGGTTTTCAAGGCAAAATTCAATGGAATCTAGAGGAATCGCAAAGGAAATCACTAGGCGAATGAAAAGTAGTATACACAACGGATCTATGATCTTTTCATCTTCTAGAATTAGAGGATATGCCGGGGATGATAGTTCATGTGACTTCTCTGAAAATGAATCTGCAGAGGAATCAGAGGTAACATCTGTAACCTTGGCAAACTCTGTTGACTTGAGTAATCATAGCAGGCCATCATCCCGTTTGAGTGAATCATCTGTTAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGGCACACAAGTCTCAACAGGTACAAGCCATCAATAGGGGCAGCACGCTGGCTGAAATGCTTGCTATACCTGATAAGGAAATGAATGCAGCAAATTTTAAGAGTACGTCTTCTGGGGGAGTTTTCTATAATAAATTTCCCACCAACACCACACCTGCTGGGCCAGTTGAACCTTTGGGTATCAGCAGTAAGGATGGTTGGAAGGATGGATGTATTGGAAGTCTGTCAAGATCAAGATCTCTTCCTGCTTCATCCACAGGATTAGGAGGTCCTAGGACGCTTCATGTTGATCGATTTATTATGCCAAAGGAAGCCCCTAAGCGGGAAAGAAGAAAAGCTGCAAAGAGTGTTTATCAGCAACAAGGTTCGAATGCCAGAAACTTAAAATCTGGTCATAAGAAGTCCCTTTCCTCTCATTGTACAAATATGGAAATTTATGATTCTTCACCAGACATTAACACAATCCAAGATAAAGTGAATACCAAGCCCGAAGAAGATCCACCCAAGATAGAAGTTCCATCATCTGATTCATTAACCGAGATCCCCAGAGGTACAAGTGTAATTACTGAAGATGTGGTGGATGCAACGCTCGTAAACACAGCTGGTTCTTCTGAACCTCCTGATCCAGACCTTCATGAATTACCTTCTGGCATATTGACCAGTGGCAACCCTAGTGCCGCTGAAGAAGACAATTTTCTACGGCAGGAACCGTCAGTTGGTTCTTACAGTGGAAGTTCGGTCTCCTCTCAACCACTTGTACCTGGACTTGAATCTTCATGCTGTAAAGATGCTGATCAACCAAGTCCAGTTTCTGTCCTGGAGCCTTCATTTACAGATGATGTATCATCTTGTTCTGAATGCTTTGAAAGTCTTAGCGCTGACCTCCAAGGTCTTCGAATGCAACTTCAGATGCTAAAGTTGGAAAAGTTGGAATCCGAAGAATACGTGGAGGGAGCAATGCTGATTTCAAGCGATGAAGATGGTGGGGAAGCATGTCTTGGAATTTCAGAAGGGAATGATTTAGATGGAGATAGCTGGGAATCTTCCTACATTATTGATATCTTGTCTGAGTCTGGCATTGATGGGGCCTATCCCCTTGCATATTCGGAGGGATGGTACTCTCCTGAGTGCCCCGTGAGTCCTACAGTGTTTGATGAACTTGAAAAGAGGTACTCTGATCGTACAGCTTGTTCAAGGCCAGGAAGGCGGATGCTTTTCGACCGTGTAAATTCCGGCATCATGAAGATCTACAAGCAATTCGAGAATGATCTGCCATGGTTGAATCCAACAGTAACAACAAATATTGTTGGTTGCAAACTGATGAAAAAGGGGCTCCGAGATGATCTGTGCACTCTGCTGAGGAGCCAAGCAAAAGTAAAGGATGACGCTCTGGGAAATGTACTTGCAAGGGAATCGGAATGGTTGGACGTGAGAGATGGCGTTGATACAGTAGGTAGGGAAGTTGAGAGGTTACTATTAGATGATCTAGTGGCAGAAGTAGCTGGTTCTTTATACATTTTGTACCCAAAGTAG 2856 0.4293 MRKCERYDFLPIRFQLQPNNSSSKFGWRSSKQLFGTPIKKLLAEEMSGETDSKRRSPSVIARLMGLDGMPLQQPANKQHKSSSEVHLQRRPQLEITHSGRSSRRSSRDQQEFKDVFEVSEIPKAESCRYPSQGADLIATDAEISFIEQKFMDAKRLATDRDSLSSKEFDDALEVLDSNTDLLLKYFQRPDSLFKKHLNDLQTAPLQSHCKYVEAMTSTDREKYEQHYDFSWRSTQDTTRLNCNRSHQKRLDGYPAQFDRRHAVHSSPKSPKLQLSGKDKQDAIPRRIVVLKPNLGKVQNSTKCLSSSCSSHAFLSESGNSAAYPEVRNSGLELHKRNLPDTVGFSRQNSMESRGIAKEITRRMKSSIHNGSMIFSSSRIRGYAGDDSSCDFSENESAEESEVTSVTLANSVDLSNHSRPSSRLSESSVSREAKKRLSERWKMAHKSQQVQAINRGSTLAEMLAIPDKEMNAANFKSTSSGGVFYNKFPTNTTPAGPVEPLGISSKDGWKDGCIGSLSRSRSLPASSTGLGGPRTLHVDRFIMPKEAPKRERRKAAKSVYQQQGSNARNLKSGHKKSLSSHCTNMEIYDSSPDINTIQDKVNTKPEEDPPKIEVPSSDSLTEIPRGTSVITEDVVDATLVNTAGSSEPPDPDLHELPSGILTSGNPSAAEEDNFLRQEPSVGSYSGSSVSSQPLVPGLESSCCKDADQPSPVSVLEPSFTDDVSSCSECFESLSADLQGLRMQLQMLKLEKLESEEYVEGAMLISSDEDGGEACLGISEGNDLDGDSWESSYIIDILSESGIDGAYPLAYSEGWYSPECPVSPTVFDELEKRYSDRTACSRPGRRMLFDRVNSGIMKIYKQFENDLPWLNPTVTTNIVGCKLMKKGLRDDLCTLLRSQAKVKDDALGNVLARESEWLDVRDGVDTVGREVERLLLDDLVAEVAGSLYILYPK 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0580 951 Pfam DUF761-associated sequence motif 50 72 IPR032795 -
Lele16g0580 951 MobiDBLite consensus disorder prediction 398 426 - -
Lele16g0580 951 Pfam Protein of unknown function (DUF3741) 147 191 IPR022212 -
Lele16g0580 951 PANTHER AFADIN 20 945 - -
Lele16g0580 951 MobiDBLite consensus disorder prediction 69 115 - -
Lele16g0580 951 MobiDBLite consensus disorder prediction 385 442 - -
Lele16g0580 951 MobiDBLite consensus disorder prediction 640 670 - -
Lele16g0580 951 MobiDBLite consensus disorder prediction 544 621 - -
Lele16g0580 951 MobiDBLite consensus disorder prediction 557 598 - -
Lele16g0580 951 Pfam Domain of unknown function (DUF4378) 789 940 IPR025486 -
Lele16g0580 951 Coils Coil 729 749 - -
Lele16g0580 951 MobiDBLite consensus disorder prediction 427 442 - -
Lele16g0580 951 MobiDBLite consensus disorder prediction 82 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0580 Lele-ChrLele16 3266044 3270183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0580 30 946 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.780 2.47e-132 420
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1139 06 7071433 7074688 Lele16g0580 16 3266044 3270183 CCT
Lele07g1324 07 7989105 7990190 Lele16g0580 16 3266044 3270183 CCT
Lele08g1130 08 7082320 7083405 Lele16g0580 16 3266044 3270183 CCT
Lele13g1842 13 26384161 26388921 Lele16g0580 16 3266044 3270183 hybridization
Lele14g1786 14 24773783 24779019 Lele16g0580 16 3266044 3270183 hybridization