Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0558 ATGGAAGGTAATTCATCTTCGTCGACGAGAAGGGAGTTGAGGGCACTGGTTGTGGACGATCAAGAAATGCTGAGGAAGATCCACGAGAGAATGTTGAACAATCTTGGAGTGAAAAACGTGGAGGCTGTGGGAAATGGGAAAGAAGCCGTCGACATTAACAGAGCAGGAAGAAGTTTTGACCTAATTCTCATGGACCTGGACATGCCAATCATGAACGGCATCGAGGCGACGAGGGAACTTCGCGCAATGGGAGTTAAAAGCAAGATCGCAGGCGTATCAGCAAGAAGCGAAGAAGCACGAGTTCAAGAGTTCATCGGAGCTGGCCTCGATCTCTTCCTCGAGAAACCCTTAACCTCTGAAAAGCTCTCTTCACTTGTTCGCCATATCAGCCCTCTTTAA 399 0.4837 MEGNSSSSTRRELRALVVDDQEMLRKIHERMLNNLGVKNVEAVGNGKEAVDINRAGRSFDLILMDLDMPIMNGIEATRELRAMGVKSKIAGVSARSEEARVQEFIGAGLDLFLEKPLTSEKLSSLVRHISPL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0558 132 ProSiteProfiles Response regulatory domain profile. 14 130 IPR001789 GO:0000160
Lele16g0558 132 CDD REC_hyHK_CKI1_RcsC-like 16 126 - -
Lele16g0558 132 Gene3D - 2 131 - -
Lele16g0558 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 129 - -
Lele16g0558 132 SUPERFAMILY CheY-like 12 129 IPR011006 -
Lele16g0558 132 SMART REC_2 13 126 IPR001789 GO:0000160
Lele16g0558 132 Pfam Response regulator receiver domain 16 126 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0558 Lele-ChrLele16 3152969 3153516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0558 10 129 Response Regulator Gene Family AT3G04280 42.276 1.66e-23 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele16g0558 Response_reg 2.5e-24 CL0304