Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0553 ATGAACGGGGTGCAGAACAAAAAGATTCACAATATTGAGAAACCTTTTCCAGGATGCCTGGGAAGAATGGCAAACCTCTTTGATTTGTCTGCAGGCGTAACTGGAAACAAGCTAATCACAGATAAGCCACATCATGATGCCTCACTTTCAAGGAGCCAATCTGATGTTACAAGGATCTGGAGCCCTCCTTTTGGTGATCAGATTGAAGATAAACTGGTCATTTCTGACTTAACTAGAACATTTTCAAAGAACAAAATAAATGGGACGCCTATCAAGATGCTCATAGACCAAGAAATGTCAAAAGACGTTGACTCTAATCGCAGCCCACCCAATGTAGTGGCCAAATTAATGGGGCTTGAGGCCCTTCCTCACGAAGATCCTAATTTAGCTGTGCAGAAAAGTCATAGAAAATATTATACTCAACATATGTGTGGTCATTCAGAAAAACCATCCAGACATTGGCTGCTGGAAGATAGTTTTATGGACAAGCAAACGGTACATGAAGTTCATAACACCACAGAACAGGTTGATTACAAGGATATTTATGAAATATGGCGTCAATCTAGGAGCACTAGCCATGTAAGAGAGAAGACGCCAGAGAGAGTAAGGCGAAGTCAAAGTCAAAAAATTGTGGAAGCAAAAGATCTGTCTTCAGATGAGATGTGCCAGTCCAAGGAAGTTGAAGACGCCTTGGAAGTTTTAAGTTCCAATAAAGATTTATTACTCAAGTTTCTGGCTTCTCAAAATCTTTGTGAATTTCAGTCTACACCACCACCTGAGACAAAGCGTATAACTGTTCTTAAACCTTCAAAGATGATTGACAATTACAAATCTCCTTACAAGGAGAAGAATGATAAACCAGTGAAGAAACCAGCTCATGTTGGGCAAGCAGCTGTATGGGACAAAAGGGATTATGGATACTCTCTAGCCAGTCAGAGGGTTGATGAGTATCCAGGTCAACCTACTCGAATAGTGGTATTGAAGCCTAGCTTTGGGAAGACAAATGAGAGTAAGGCTGTGGTTACCCCAACTTCATCCTCTTCTCAAGATCTGCAAATTGGAAGTTTCAATCAGGAACCTGAAAATGATGTACTAGAATCAAGGAAGGCAGCACAAGAGGTCGCAGAGCAAATGCAAGAAAATCCTAGGGGTCTTCAAAGAGATGAAACTTTGTATTCATCAGTCTTTTCCAATGGTTATACTGGTGATGAGAGCTCATTCAATCAATCAGAAAATGAGTATGCGGCAGGGAATTATAGTGATTCAGAATTTATGTCTCCACCTCCAAGGAGTTCTTGGGATTACATCAATCGTACCAGTAGCCCTTATTCTTCATCATCTTTCGCTCGTGCATCCATTTCTCTGGAATCATCAGTGTGCAGAGAGGCAAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCATCAAATACGAATCCTCAGGAACAGAGTCAAGCACGGAGAAGCTCTACCTTAGGTGAGATGCTTGCTCTATCTGACATAAAGAAATCTTCAATTTCTCAGGTTGAGGTTATTATCAAAGACCAAGAACCGAGGGAATCTGTTTCCTGCAAAAATAATTTCAATGAAGAACATGTGGGTGATTCTCCCAAAAATCTTTCCAGGTCAAAGTATGTCCCTGTATCTTCTAATGTTTATGAAACTGGGTTCAATGTTGAAGTTTGCAATCCAGAGATTGGCAATACACGTATTTGCAAGGAACTGGCAAAGTCAAAGAGCACGAAGTCATCATTTAAAGGGAAAGTTACAAGTCTGTTCTTCTCAAGGAACAAAAGGTCGAGTAAGGAAAGATATAGTCTATCAGAATCTAAAAATGAATCCCAATCTACTAGTATTGAAGCGTCAAAATCTCCATCAAATTTTCCTGGGATCCGTGGAGATGATTTGTCTCATAGCTTCAACAGTGGTGGCTTTGGAGACCGTTCCCTTCATTATCACTGTGAACCATCAAGTAAGTCTTCATCAGATTCAGTCTCTAACGGACGAAAGGGCCTAATTTCTCTTGAGCCTGGATTGACTGTGTCAAAACCTGGTGCTCTGGGCATATCAAACCAGATCCTGGATCAGCCAAGTCAAATTTCAGTTTTAGAACCTACTTTTGAAGATGATAATGCAGCTCGAGAATCCTCTGACTGTATGAAGGCCGGACAATTTGGAACACGGGGACATTTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATATCCCGGACCCTCGCATGGGATGATCCTTGTGCAGAGGTAGCAAGTTCATATCCGCGAAAACCATTGATGACTTCCCTCGACCCAGTGGCAGAGGAACGAGACTATCTTGTGTTGGTCCAGAAACTACTATCAGTGGCCGGCCTTGATGATCAATTGCTGTCAGACTCATTTTACTCAAGATGGTATTCACCTGAGAGCCCATTGAATCCATCACTGAGGGACAAATATGCCAATCTGAACGACAAGGCGCCTCTCCAGGAGGCCAAACGAAGGCCGCAAAGATCAACTCAGATGCTTATATTTGACTGTGTTAGTGCTATATTAATGGAAATTAGTGGTTACGGGTCAGAAGAGTACTTAATGAGAAGGATGTGCCGGCAGCCAGAGGGTTCATCTCCCCTACTGATAGACCTCGTTTTGTCCCGAATGAACGAAATGACGTCTGGTGGGATGAAGTTTGATTGGGAGTATGGTGGGGACAGCAACAACATGATGTTAGAAATGGTTGTTAGGGAGGAGGTTGTGGGAGAGGGATGGTTCGAGCTAAAGGGATTGGAGATTGATATTCTAGGTATGGAAATAGAAGGGAAGTTGCTGGAAGAGCTCGTAGAAGAGGCTGTCGTTGATGTGACTGGTGGGGTCTAA 2880 0.4226 MNGVQNKKIHNIEKPFPGCLGRMANLFDLSAGVTGNKLITDKPHHDASLSRSQSDVTRIWSPPFGDQIEDKLVISDLTRTFSKNKINGTPIKMLIDQEMSKDVDSNRSPPNVVAKLMGLEALPHEDPNLAVQKSHRKYYTQHMCGHSEKPSRHWLLEDSFMDKQTVHEVHNTTEQVDYKDIYEIWRQSRSTSHVREKTPERVRRSQSQKIVEAKDLSSDEMCQSKEVEDALEVLSSNKDLLLKFLASQNLCEFQSTPPPETKRITVLKPSKMIDNYKSPYKEKNDKPVKKPAHVGQAAVWDKRDYGYSLASQRVDEYPGQPTRIVVLKPSFGKTNESKAVVTPTSSSSQDLQIGSFNQEPENDVLESRKAAQEVAEQMQENPRGLQRDETLYSSVFSNGYTGDESSFNQSENEYAAGNYSDSEFMSPPPRSSWDYINRTSSPYSSSSFARASISLESSVCREAKKRLSERWAMMASNTNPQEQSQARRSSTLGEMLALSDIKKSSISQVEVIIKDQEPRESVSCKNNFNEEHVGDSPKNLSRSKYVPVSSNVYETGFNVEVCNPEIGNTRICKELAKSKSTKSSFKGKVTSLFFSRNKRSSKERYSLSESKNESQSTSIEASKSPSNFPGIRGDDLSHSFNSGGFGDRSLHYHCEPSSKSSSDSVSNGRKGLISLEPGLTVSKPGALGISNQILDQPSQISVLEPTFEDDNAARESSDCMKAGQFGTRGHLKSNLIDKSPPIESISRTLAWDDPCAEVASSYPRKPLMTSLDPVAEERDYLVLVQKLLSVAGLDDQLLSDSFYSRWYSPESPLNPSLRDKYANLNDKAPLQEAKRRPQRSTQMLIFDCVSAILMEISGYGSEEYLMRRMCRQPEGSSPLLIDLVLSRMNEMTSGGMKFDWEYGGDSNNMMLEMVVREEVVGEGWFELKGLEIDILGMEIEGKLLEELVEEAVVDVTGGV 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0553 959 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 957 - -
Lele16g0553 959 MobiDBLite consensus disorder prediction 335 364 - -
Lele16g0553 959 Pfam Domain of unknown function (DUF4378) 784 950 IPR025486 -
Lele16g0553 959 MobiDBLite consensus disorder prediction 610 625 - -
Lele16g0553 959 Pfam Protein of unknown function (DUF3741) 207 249 IPR022212 -
Lele16g0553 959 MobiDBLite consensus disorder prediction 335 361 - -
Lele16g0553 959 MobiDBLite consensus disorder prediction 369 388 - -
Lele16g0553 959 MobiDBLite consensus disorder prediction 603 635 - -
Lele16g0553 959 Pfam DUF761-associated sequence motif 109 124 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0553 Lele-ChrLele16 3117734 3121428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0553 1 956 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 41.348 0.0 572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1183 06 7383107 7399032 Lele16g0553 16 3117734 3121428 CCT
Lele07g1372 07 8327048 8328637 Lele16g0553 16 3117734 3121428 CCT
Lele08g1174 08 7379527 7381127 Lele16g0553 16 3117734 3121428 CCT
Lele05g1315 05 8241584 8247532 Lele16g0553 16 3117734 3121428 CCT
Lele13g1869 13 26541017 26544711 Lele16g0553 16 3117734 3121428 hybridization
Lele14g1809 14 24897685 24901379 Lele16g0553 16 3117734 3121428 hybridization