Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0549 ATGACATACACTTCTACTAGTCTGCCAACCAAAAAGGTTGCAAATGGCACTCAGGGCAGAGCTGTTTTAGAAGAGCTAGAAGCCGATGGAGTGGAAGTGGATACATCTTTTTTCGTGGTATCCAAGGAGGGGTGCTCACCATTTTCGTACATCATCATCGACAGCCAGACGAAAACACGTACATGCATATTCACCGCAGGATATCCTCCCATGATACCGGAAGATCTTTCAAGAGACAGTTTGTTATCTGCACTGGATGGAGCAAAATTGGTTTATTTTGATGGGAGGATGCATGAAACTGCTCTGTTCATTGCTCGAGAGAATATACCTAGCTTAGTTGGTGCTGAAAGACCAAGGGAAGGATTAGATGAGCTCCTGACTATGACTGATTATCCTGTATGCTCGAAAAGATTCCCACAGGCAAACGGTCGGCAGATAGAAGAAATGGATGTAGACAGCTCTCTCGAATCCTTAGCAAGGCAAAAGGATGGCGGCATAGTCATGCCAACCTGCAATAGCATCGAAGGCATAGGAAGTGTGTGTGGGAGGTTATATCTTGGGACAGCTGAGAAAATTCCTCCTTCAGAGCTCATTGATACAACTGGTGCTGGGGATGCATTCGTTGGAGCTGTTCTGTATGGCAGCTGCAAAATGTAA 657 0.4551 MTYTSTSLPTKKVANGTQGRAVLEELEADGVEVDTSFFVVSKEGCSPFSYIIIDSQTKTRTCIFTAGYPPMIPEDLSRDSLLSALDGAKLVYFDGRMHETALFIARENIPSLVGAERPREGLDELLTMTDYPVCSKRFPQANGRQIEEMDVDSSLESLARQKDGGIVMPTCNSIEGIGSVCGRLYLGTAEKIPPSELIDTTGAGDAFVGAVLYGSCKM 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0549 218 SUPERFAMILY Ribokinase-like 12 215 IPR029056 -
Lele16g0549 218 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 199 212 IPR002173 GO:0016773
Lele16g0549 218 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 144 217 - -
Lele16g0549 218 Pfam pfkB family carbohydrate kinase 190 214 IPR011611 -
Lele16g0549 218 Gene3D - 7 217 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0549 Lele-ChrLele16 3057727 3060526 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0549 16 3057727 3060526 Lele05g1315 05 8241584 8247532 CCT
Lele16g0549 16 3057727 3060526 Lele06g1176 06 7356773 7361083 CCT
Lele16g0549 16 3057727 3060526 Lele07g1364 07 8289353 8293534 CCT
Lele16g0549 16 3057727 3060526 Lele08g1167 08 7342178 7346701 CCT
Lele13g1873 13 26598546 26603051 Lele16g0549 16 3057727 3060526 hybridization
Lele14g1813 14 24953851 24958751 Lele16g0549 16 3057727 3060526 hybridization