Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0548 ATGCCAACTTCGATTGTCTTCCTCCTTGTTTTTCTTAACTTACTTATCTCTTCCCCAGGTTATTTCTCTTTGACAATACTCATGCCTCCTCCTCCAAAACCATGCCAGCCATTGTCTGTCAGGGAAATGTTATTTAAGCAGGTTAGGTCATTTTCTGCTAGTGTATCATTTGCTTCACCTAAACCTGCTAAAACTTGGTTGGTTAAGCCTTCTTTGGGGCCTTCTTTGGCACCTGCGCCATCTCCATCTGACCAAGGTCCAAGTGTGAATATTAGACCAAGACATCATCACCATCTCCGTCATCACCGTGGTGGGAGACCCCATGTAGTAGCTCCATCCCCTTCTAAAGATCAAGGTTGTGACCAAATATGTACTGATCCACTCACAGCGACCCCCTTTGGTTCACCTTGTGGCTGTGTCTTTCCCATGAAAGTCAAACTTATTTTGGATGTTGCACCTTATTCAATTTTTCCATTAATGAATGAGTTAGAGATTGAGGTTGCATCAGGTACATATTTGGAACAAAGCCAGGTGAAGATAATGGGTGCAAGTGCTGACAGTCAAGATCAGGGAAGAACTGTAGTTGATATGAACTTGGTTCCATTGGGAGAGAAGTTTGACAACACCACTGCAGTTCTGATATATGATCGGTTTTGGCACAAGAAAGTTCCTCTAGATAAGAGCCTTTTTGGTGATTATGCAGTTATGTCCATTAGTTATCCAGGGATTCCATCATCACCGCCATATGGAAGCTATGTTGGAAATGGTCCTAGTGGGAGTGCCGGTAATCTTCCGATCACTGCCAACTTTGTCAGCAAGAACCAGAAAATGAATCTTAGAACCATAGTCATCATTGCTTTATCTGCCTTTGTACTCATGCTGGTTTTGATTGGAGCATTTTCCATTGTGTTGAAATGGAGGAGGATTAGGAGACCATCAAGTGCCATTGGGCCTGCATTTACTTCATCAATAAACAAGCGATCTGGTATGGCGTCTATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCCCTTAGGTCCACCATGGCTACTTCTATTCTCTCTGTTAGAAAATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTATTAGGAGAAGGGGGATTTGGGCGTGTTTATAGTGGGACATTAGAAGATGGAACTGAAGTTGCGGTTAAGCTGCTAACAAAGGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGCTTGCATCACCGTAATCTTGTGAAACTCATTGGTATCTGCATTGAAGGGCGCAGACGGTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACAATAAGGGACCTCTTGATTGGGAAGCAAGGATGAAAATTGCTCTTGGAGCAGCGAGAGGGTTGGCCTATCTTCATGAAGACTCTAATCCTCGTGTAATTCATCGAGATTTCAAAGCCAGTAATGTGTTATTAGAAGATGATTTCACTCCTAAGGTTTCTGATTTTGGCTTGGCGAGAGAAGCAACTGAAGGAAGTCATCATATTTCTACTCGTGTCATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAGAGTGATGTTTATAGTTATGGGGTAGTGCTGCTTGAGCTTCTTACTGGCAGAAAACCAGTGGACATGTGTCAACCTCCTGGGCAAGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGTAGAGAAGGTTTAGAACAGCTAGTGGATCCATCCTTAGCTGGAAGTTATGACTTTGATGATATGGCAAAGGTGGCCGCCATTGCCTCCATGTGTGTCCACCCCGAGGTCACACAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTGAAATTGATATACAATGACACAGATGAGACTTGCGGGGATTGCTGTAGTCAGAAGGAGTCTTCTGCTCAGGAGTCTGACATTAGAGCTGATCTTGCTCCTTCAGATAGCAGTTGGTGGAATGCCGGAGGGCTGACCCCAAGGTTAACTTATGGTCAAGCATCTTCCTTCCTCACAATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACAGTTTTCAACTTCAAGTTTACTGGGAGACGAGATATCTTCACCAATTAGGCATGGGAACAGATCAGGGCCTTTGAGATCAGTCCGAAGCAAGCTATCTCTGTATAGATTTACCGGAAGTAGGAGTGAACATGGGGGATTTCCTTCCAAGCGGGGTTTAAATGATGATTACTGGGTTTAA 2325 0.4383 MPTSIVFLLVFLNLLISSPGYFSLTILMPPPPKPCQPLSVREMLFKQVRSFSASVSFASPKPAKTWLVKPSLGPSLAPAPSPSDQGPSVNIRPRHHHHLRHHRGGRPHVVAPSPSKDQGCDQICTDPLTATPFGSPCGCVFPMKVKLILDVAPYSIFPLMNELEIEVASGTYLEQSQVKIMGASADSQDQGRTVVDMNLVPLGEKFDNTTAVLIYDRFWHKKVPLDKSLFGDYAVMSISYPGIPSSPPYGSYVGNGPSGSAGNLPITANFVSKNQKMNLRTIVIIALSAFVLMLVLIGAFSIVLKWRRIRRPSSAIGPAFTSSINKRSGMASMLSSSITSSTSVSLRSTMATSILSVRKFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGVDNKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMCQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDCCSQKESSAQESDIRADLAPSDSSWWNAGGLTPRLTYGQASSFLTMEYSSGPLEEMENRQFSTSSLLGDEISSPIRHGNRSGPLRSVRSKLSLYRFTGSRSEHGGFPSKRGLNDDYWV 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0548 774 CDD STKc_IRAK 378 646 - -
Lele16g0548 774 FunFam receptor-like serine/threonine-protein kinase ALE2 345 447 - -
Lele16g0548 774 FunFam Receptor-like serine/threonine-protein kinase ALE2 448 665 - -
Lele16g0548 774 Pfam Protein tyrosine and serine/threonine kinase 374 642 IPR001245 GO:0004672|GO:0006468
Lele16g0548 774 MobiDBLite consensus disorder prediction 76 117 - -
Lele16g0548 774 Gene3D Phosphorylase Kinase; domain 1 343 447 - -
Lele16g0548 774 ProSiteProfiles Protein kinase domain profile. 372 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0548 774 PANTHER OS01G0750732 PROTEIN 113 668 - -
Lele16g0548 774 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Lele16g0548 774 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Lele16g0548 774 SUPERFAMILY Protein kinase-like (PK-like) 356 644 IPR011009 -
Lele16g0548 774 Gene3D Transferase(Phosphotransferase) domain 1 448 669 - -
Lele16g0548 774 MobiDBLite consensus disorder prediction 92 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0548 Lele-ChrLele16 3049085 3054623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0548 123 760 Receptor kinase-like Gene Family AT5G56890 54.217 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele16g0548 PK_Tyr_Ser-Thr 3.6e-48 CL0016