Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0546 ATGGCTACTCAGGGTCAAGTCATTACCTGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGCCATTGACTATTGAAGACGTTCAGGTGGCCCCACCGCAGGCTGGTGAGGTTCGAGTCAAGATTATTTACACTGCTCTCTGTCATACCGATGCTTACACTTGGAGCGGTCAGGATCCAGAAGGTCTATTCCCCTGTATTCTTGGTCATGAAGCTGCCGGAATTGTAGAAAGTGTTGGAGAGGGTGTTACTGAAGTTCAGCCTGGAGATCATGTCATCCCGTGTTACCAGGCTGAATGTAGAGATTGCAAGTTTTGCAAATCTGGCAAAACAAACCTTTGTGGCAAAGTCCGTTCTGCCACTGGAGTTGGTGTCATGCTGAGCGACCGCAAGAGTCGTTTCTCTATTAATGGAAAGCTCATCTATCATTTTATGGGAACCTCAACTTTTAGTCAATACACTGTTGTTCATGATGTTAGTGTAGCTAAGATTGATCCAAAAGCTCCTCTAGAGAAAGTTTGTCTTCTTGGATGTGGTGTCCCAACTGGTAAGTATTTTAGCTTTGCTAGTAGAATTTTTTTTGATGTTGACCGGATATATAGAAGCAGTCTGTCCTTCCTGAATTCCGAGTGTCATTATCTGTCTTGA 645 0.4496 MATQGQVITCKAAVAWEPNKPLTIEDVQVAPPQAGEVRVKIIYTALCHTDAYTWSGQDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRDCKFCKSGKTNLCGKVRSATGVGVMLSDRKSRFSINGKLIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGKYFSFASRIFFDVDRIYRSSLSFLNSECHYLS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0546 214 PANTHER ALCOHOL DEHYDROGENASE 5 182 - -
Lele16g0546 214 SUPERFAMILY GroES-like 3 183 IPR011032 -
Lele16g0546 214 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Lele16g0546 214 FunFam alcohol dehydrogenase 1-like isoform X1 18 181 - -
Lele16g0546 214 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Lele16g0546 214 Gene3D - 13 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0546 Lele-ChrLele16 3034691 3036694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0546 10 178 Monolignol Biosynthesis Gene Families AT1G72680 28.235 1.51e-12 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1189 06 7471130 7480201 Lele16g0546 16 3034691 3036694 CCT
Lele07g1381 07 8395248 8403696 Lele16g0546 16 3034691 3036694 CCT
Lele08g1183 08 7466075 7475286 Lele16g0546 16 3034691 3036694 CCT
Lele13g1879 13 26633010 26636438 Lele16g0546 16 3034691 3036694 hybridization
Lele14g1816 14 24973621 24986104 Lele16g0546 16 3034691 3036694 hybridization