Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0539 ATGGAATCCCAAAAAGTTCACTTTTTCCTACTCACTCTTTTCTTCCACTACTTTCGCACCATCCATGCAGATACTCTAGTAACTTACATAGTTCAGCTTGACCCACACGGCACAAGCAGCTCTCTCTTCACCTCCAAGCTTCAATGGCATCTTTCCTTTTTACAACAGACCATTTCGTCTGATGATAACAATAACTACCCTTCTTCTCGCCTCCTTTACTCATACCGTTCCGCCATGGACGGTTTTGCAGTTCAGTTGACACAGTCTGAAGTTAAGCACTTGCAAAGCCTCCCTGATGTTATCTCCATTAGACCAGACGGCAAGATCCAGATTCAAACCACCTACTCTTACAAGTTCTTAGGACTGAACCCCAGGGGAGAAGATGCTCGGTATCGCTCTAGCTTTGGCCGTGGAACCATAATTGGGGTGCTTGATACAGGAGTGTGGCCAGAGAGTCCAAGCTTCAATGACCATGGAATGCCTCCAGTTCCCAAGAAATGGAAAGGCATATGCCAGAAAGGGCAGGTCTTTAACTATTCCAATTGTAACCGAAAACTCGTTGGAGCGAGGTACTTCACCAAAGGTCATCTTGCAGCTTCACCTTCAAGAATTGCAGAATATCTCTCTCCGAGAGACTCTAGTGGCCATGGCACTCACACTTCAACTACTGCTGCCGGAGCATCAGTGACTATGGCTAGTGTTCTTGGTTATGCTTCTGGTGTGGCTAGAGGAATGGCTCCTCAGGCTCACATTGCAATATACAAAGTGTGCTGGTTCAATGGCTGCTATAACTCTGATATCCTTGCTGCTATGGATGCAGCCATTAGAGATGGCGTCGACATTCTTTCCTTGTCTCTAGGTGGCTTCCCAGTACCTCTATACAATGATAATATTGCCATCGGAAGCTTTCGAGCGATGGAACATGGGATTTCTGTTGTATGTGCAGCAGGAAACAATGGCCCAATAGCCATGTCTGTTTCCAATGAAGCTCCTTGGATTGCCACTGTTGGTGCGAGCACACTAGACAGGACATTCCCAGCCATAGTTCACATGGGAAATGGGCAAATTCTCTATGGAGAATCCATGTATCCAGCGAACCGTACTATGAGCAAAGGCAAAGAACTCGAGCTAGTTTATCTGACTGATGGGGATAGGATGAGTCAATTTTGCCTCGCAGGGTCTCTTCCGAGGGACAAAGTTAGGGGCAAAATGGTGGTGTGTGACAGAGGCATTAATGGAAGAGCAGAAAAAGGTCAAGTTGTGAAGGAAGCTGGTGGTGCCGCCATGATTTTGGCAAACACAGCGATAAACTTGGAAGAGGATTCAGTTGATGTTCATGTCCTTCCAGCAACGTTGGTAGGCTTTGATGAATCTACTCGCTTAAAAGCTTATATGAACTCCACCGAGAGGCCTCTTGCTCGACTTGAATTTAGAGGAACTGTCATAGGGAGGTCCAGGGCTCCAGCGGTGGCAAGATTTTCAGCTAGAGGACCAAGTTTTACTAACCCTTCAATCCTCAAACCAGATATAATTGCTCCAGGTGTCAATATCATTGCTGCTTGGCCTCAAAACTTGGGTCCCACAGCCCTTCCAGAAGATTCTAGAAGAGTGAACTTCTCTGTCATGTCAGGTACCTCAATGTCATGTCCTCATGTCAGTGGAATCACTGCTCTTATACGCTCAGCACACCCAACATGGAGCCCAGCAGCTATCAAATCTGCAATTATGACTACAGCTGAAGCAACCGATCATGCAGGAAGACCCATACTTGATGGAGATGAACCAGCAGGTGTTTTTGCCATGGGAGCTGGCCATGTGAACCCAGAGAGAGCTATAAACCCAGGTCTGGTTTATGATATTGGACCAGATGACTATGTCACTCATCTTTGCACTCTTGGATATACAACATCAGAAATTTTCAGCATAACTCACAGAAAAGTGAGTTGCTATGAGATCTTGCGGATGAACAAAGGCTTCAGTCTTAACTATCCATCATTCTCTGTGATCTTTAAGGACGGAATGAGGGTGAAGAAGTTCAGCAGGCGACTAACTAATGTGGGAAGTCCTAACTCCACCTACTCATTGGATGTTATGGCACCTCAAGGAGTGAAAGTGATAGTAAAACCCAGGAGGCTGGTATTTGACAATATATATCAAAGGTTGAATTACAGGGTATGGTTTATATCAAGGAAGGTGAAAGGAGCTGATTCAATGACATCTGCAGAAGGGCACTTAACATGGGTTCATTCTCAGAATGGTGCCTACAGAGTCAGAAGCCCCATTGCAGTAACTTGGAAGGTTAAGTAG 2307 0.4569 MESQKVHFFLLTLFFHYFRTIHADTLVTYIVQLDPHGTSSSLFTSKLQWHLSFLQQTISSDDNNNYPSSRLLYSYRSAMDGFAVQLTQSEVKHLQSLPDVISIRPDGKIQIQTTYSYKFLGLNPRGEDARYRSSFGRGTIIGVLDTGVWPESPSFNDHGMPPVPKKWKGICQKGQVFNYSNCNRKLVGARYFTKGHLAASPSRIAEYLSPRDSSGHGTHTSTTAAGASVTMASVLGYASGVARGMAPQAHIAIYKVCWFNGCYNSDILAAMDAAIRDGVDILSLSLGGFPVPLYNDNIAIGSFRAMEHGISVVCAAGNNGPIAMSVSNEAPWIATVGASTLDRTFPAIVHMGNGQILYGESMYPANRTMSKGKELELVYLTDGDRMSQFCLAGSLPRDKVRGKMVVCDRGINGRAEKGQVVKEAGGAAMILANTAINLEEDSVDVHVLPATLVGFDESTRLKAYMNSTERPLARLEFRGTVIGRSRAPAVARFSARGPSFTNPSILKPDIIAPGVNIIAAWPQNLGPTALPEDSRRVNFSVMSGTSMSCPHVSGITALIRSAHPTWSPAAIKSAIMTTAEATDHAGRPILDGDEPAGVFAMGAGHVNPERAINPGLVYDIGPDDYVTHLCTLGYTTSEIFSITHRKVSCYEILRMNKGFSLNYPSFSVIFKDGMRVKKFSRRLTNVGSPNSTYSLDVMAPQGVKVIVKPRRLVFDNIYQRLNYRVWFISRKVKGADSMTSAEGHLTWVHSQNGAYRVRSPIAVTWKVK 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0539 768 Pfam Subtilase family 136 582 IPR000209 GO:0006508|GO:0008236
Lele16g0539 768 CDD PA_subtilisin_like 349 475 - -
Lele16g0539 768 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Lele16g0539 768 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Lele16g0539 768 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Lele16g0539 768 SUPERFAMILY Subtilisin-like 112 616 IPR036852 GO:0004252|GO:0006508
Lele16g0539 768 FunFam Subtilisin-like protease SBT1.5 138 353 - -
Lele16g0539 768 Gene3D - 629 766 - -
Lele16g0539 768 Pfam PA domain 376 458 IPR003137 -
Lele16g0539 768 ProSiteProfiles Serine proteases, subtilase domain profile. 116 612 - -
Lele16g0539 768 Pfam Peptidase inhibitor I9 28 111 IPR010259 -
Lele16g0539 768 Pfam Fibronectin type-III domain 661 763 IPR041469 -
Lele16g0539 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Lele16g0539 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Lele16g0539 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 64 763 IPR045051 -
Lele16g0539 768 Gene3D Peptidase S8/S53 domain 138 625 IPR036852 GO:0004252|GO:0006508
Lele16g0539 768 CDD Peptidases_S8_3 110 579 IPR034197 -
Lele16g0539 768 Gene3D - 342 482 - -
Lele16g0539 768 FunFam subtilisin-like protease SBT1.5 342 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0539 Lele-ChrLele16 2988330 2990636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0539 9 766 Subtilisin-like Serine Gene Family AT1G04110 65.104 0.0 1056