Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0534 ATGTCGAAGAGAGGTCGCGGTGGTTCGGCCGGAAACAAGTTTCGGATGTCACTGGGTCTACCGGTGGCGGCGACAGTGAACTGCGCCGATAACACTGGAGCGAAGAATCTGTACATCATTTCAGTGAAGGGGATCAAGGGTCGCCTTAACCGTTTGCCGTCTGCTTGCGTTGGGGACATGGTCATGGCCACCGTGAAGAAAGGGAAGCCCGATCTCCGGAAGAAGGTCCTGCCCGCCGTGATCGTACGCCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTTTACATGTACTTCGAAGAACGTTTGCCTGGTTTGACGTTATATAATGCTGGGGTCATTGTGAATCCCAAGGGAGAAATGAAAGGTTCTGCTATCACTGGTCCAATCGGTTTTGTTTTGAAAAGGCATTTGAGTTTTTGGTTGTTTGGTGAGATCATTTTGCGATCATGGTTCGAACTAGCAGCAAGAACACTTGCTACGTCTTATAGAACTATAGAAGATTGGTATTGGGCAAAGACGTCATACGTGGAAACTACTACTGATGAAACTTCATCTGCAGGAGCTAGCTTGAAGCGTACCATCTTAATGTCGCGAGGACCTCATTCCACTGATATTCCTGATTTGAAACATCCTCAAAAAAAATATCATCACCGCTTAAAAGCTGAGCTTTCTCAGATCTATGTGAGTTCTGAAGTCGTCAAGCAGAAGCAGAAGAGAAGGCAGATGAAGATCTCAAGGCTTTATTATAGCTTTCACAGATCAGTTCAGTTGTTGAAGTTTCAGAGAAAAACCAGAGTCTGCTCCTCAGTCACACTTGGTGGTAATAATGCTCACAGAAGATCATCTCCTTCTTCATCACTTGCCTGTTTTCCTTCTTCAACCTTTCCGAGAGACATAATCTGTAAGTTGAAGAATCGATGGAAGCTAGCTTTGGGATGGCGAACCAGTGCCACTCATCAACATTATAGCTATGATCTTCGAAGTTATTGTCTTAACTTCGATGACCATCCTTCAAATCACCATATCCCTCCTCCTCTACCAATATAA 1047 0.4546 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEERLPGLTLYNAGVIVNPKGEMKGSAITGPIGFVLKRHLSFWLFGEIILRSWFELAARTLATSYRTIEDWYWAKTSYVETTTDETSSAGASLKRTILMSRGPHSTDIPDLKHPQKKYHHRLKAELSQIYVSSEVVKQKQKRRQMKISRLYYSFHRSVQLLKFQRKTRVCSSVTLGGNNAHRRSSPSSSLACFPSSTFPRDIICKLKNRWKLALGWRTSATHQHYSYDLRSYCLNFDDHPSNHHIPPPLPI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0534 348 SUPERFAMILY Ribosomal protein L14 11 136 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele16g0534 348 Hamap 50S ribosomal protein L14 [rplN]. 19 158 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele16g0534 348 Pfam Ribosomal protein L14p/L23e 22 133 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele16g0534 348 SMART Ribosomal_L14_2 19 158 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele16g0534 348 Gene3D Ribosomal protein L14 1 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele16g0534 348 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 20 131 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0534 Lele-ChrLele16 2957955 2962199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0534 1 130 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 90.769 8.02e-80 238