Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0532 ATGTCTCCTCCTACTTCTCACAAGCTTCTCAGTTTCACTCATCTTCAGGCAAATACAGACAGTAATCCGCATGAGTTGCTTGCCCATTCTCAAGCCTCGTCTGCATCTTCTGCTCCAACAGTTGCTGGTAAAGATTCCGATGGCAAGATTGTGGGATGCAAATACGGACAAAAAGATGAGCAAGGCGAGGACGATGATTCCCTTTCGAGGCAGCCGTTATGGCGCAAAGTGCCAGTACCTTCAAACCTAATCAACCCATACCGTATAGTCATTGTGCTGCGTCTGGTCATCCTAGCTTTCTTCTTCCGCTTCCGGATTTCGAATCCAGTTCACGATGCATACGCCTTATGGCTCATCTCTGTAATCTGCGAAGTCTGGTTTGCTTTGTCTTGGATTATTGATCAACTTCCCAAATGGTTCCCCATCACGCGCGAAACTTACCTGGACCGCTTGTCCATTAGGTTTGAGCACAAAGAGCCAAACCGTCTAGCCCCAGTTGATGTGTTTGTAACTACTGTGGACCCGTTGACGGAACCACCAATTGTAACGGCAAACACGGTTCTCTCAATCTTGTCCGTTGATTACCCCGTTGAGAAGGTCACCTGCTATGTCTCCGATGACGCTGCGTCTCTTCTGCTTTTTAATACTCTATCTGAAACTGCCGAATTCGCAAGAACATGGGTTCCGTTCTGCAAGAAGTATGTCATTGAGCCACGGGCCCCTGAGTTCTATTTCTCCCAGAAAGTTGATTACTTCAAAGATAAAGTGTATCCCGCATTTGTTAAGGAACGCAGGGCCATTAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGCATTGGTGGCTAAGGCTCAGAAAAGACCAGAGGACGGGTGGGTGATGCAGAATGGCATGCCATGGCCAGGGAACAACGCTCACGATCATCCAGGAATTTGTCAGGTCTCTCTGGGAGGTGCTGGTACTCGGGATGTTGAAGGCAAGGAATTGCCACGGCTTGTGTATGTTTCACGTGAAAATCGCCCTGGCTATCAACACCACAAAAAAGCTGGTGCCTTGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTACAAATGCCCCTTTCTTGTTGAATCTGGATTGTGACCACTACATCAATAATAGCAAGGCTATAAGGGAGGCTATGTGCTTTCTAATGGACCCTCATGGAAGGGGCCTCTGTTTTGTCCAATTTCCATTGAGTTTCGATGGCATGGATAGCCGTGATGGATATGCTAATCACAATACCCTTTTTTTTAATATCAACATGAAAAGCCTCGATGGGATTCAAGGTCCGGAATATTTTGGTACTGGATGTGTATTTAACAGGCGGGCTTTATATGGCTATGATCCACAAATAGTTAAGAGAGGCTCAAAGATTAATTGCGACTGGTGGCCTTTGTGGTGTTGCTGTTGTTGCAGTGGTTCTGATTCCGAGTTTGATCTAGAAGAGATGGATGAAAATCTTGAACAGTATGATGAACTGGAAATATTTGATCTCGAGGACATGGAAGAATCGCTTGAAAGTTCCGACATGGAAGGAATACTAGAAATACTTGATCTTGACCAGAGTGAAGAAGAGCTTGAAGGTTATGAGGAGCCAGAGGAACAATCCCTCATGTTACAGGAAAATTTTGTGAAACGATTCGGGCAGTCACCGATTTTTATTGCTTCCACTTTGAGTGGGGCTGGTGGAGTTTCAGAAGGCGCTAATGCTATGAAGGAGGCCATCCATGTTATGTGTTGTGATTATGAAGAGAAAACAGAATGGGGCAAAGAGATTGGTTGGATTTATGGCTCAGTCATGGAAGGTATCTTGACTGGTTTTAAGATGCATTGTAGAGGATGGAAATCAGCGTACTTCATACCAAAAAGAGCAGCTTTCAAGGGATTTGCTCCAGTAAATCTTTCAGATCAATTATGCGAAATTTTGAGACGGGCTCTTGGTTCTGTTGAGATATTCTTTAGTCGACATTGCCCTATGTGGTATGGCTTTAAAGGAAAACTGAAGTGGCTTCAGAGGCTGGCTTATACTAATACTATTGTTTACCCAATCACTTCCATCCCTTTGCTAATATACTGTACAATTCCAGCTATCTGTCTCCTGACAGGAAAGTTCATCATCCCAACATTGACAAATCTTGATAGCATTTGGTTAATGGCGCTTTTTATCTCCATCATCTTAACTTGTGCGCTAGAGCTTCGATGGAGTGGGGTTAGCATTCACGACTGGTGGCGCCATGAGCAACTCTGGATCATTGGAGGTGTTTCTTCCCATTTGTTTGCTGTATTTCAAGGTCTCCTTAAAGTTGTTACTGGAGCAGATACTGATTTCGTTGTCCGGCCAAAAACAACAAGTCACACTGGCTTCTACCTCTTAAAGTGGACTAGTCTCCTCATCCCACCAACCACTCTCGTAATCTTGAATGTTGTGGGAATTGTGGCTGGAATCTCAGATGCCGTCAACAATGGCTATGACTCATGGGGACCTTTATTTGGTAAACTATTTTTAGCCTTCTGGGTTATTATGCACTTGCATCCTTTCCTCAAAGGTCTGATGGGAAAGCAAAACAGGACTCCTACCATCGTTGTCCTTTGGTCATTAATTGTAGCTTTAGTTTTGTCTTTGCTTTGGGTTCGGATCGACCCATTTTTGCCCAAGCAAACTGGTCCGGTACTCAAACAGTGTGGGGTAGAATGTTAA 2721 0.4436 MSPPTSHKLLSFTHLQANTDSNPHELLAHSQASSASSAPTVAGKDSDGKIVGCKYGQKDEQGEDDDSLSRQPLWRKVPVPSNLINPYRIVIVLRLVILAFFFRFRISNPVHDAYALWLISVICEVWFALSWIIDQLPKWFPITRETYLDRLSIRFEHKEPNRLAPVDVFVTTVDPLTEPPIVTANTVLSILSVDYPVEKVTCYVSDDAASLLLFNTLSETAEFARTWVPFCKKYVIEPRAPEFYFSQKVDYFKDKVYPAFVKERRAIKREYEEFKVKINALVAKAQKRPEDGWVMQNGMPWPGNNAHDHPGICQVSLGGAGTRDVEGKELPRLVYVSRENRPGYQHHKKAGALNALVRVSAVLTNAPFLLNLDCDHYINNSKAIREAMCFLMDPHGRGLCFVQFPLSFDGMDSRDGYANHNTLFFNINMKSLDGIQGPEYFGTGCVFNRRALYGYDPQIVKRGSKINCDWWPLWCCCCCSGSDSEFDLEEMDENLEQYDELEIFDLEDMEESLESSDMEGILEILDLDQSEEELEGYEEPEEQSLMLQENFVKRFGQSPIFIASTLSGAGGVSEGANAMKEAIHVMCCDYEEKTEWGKEIGWIYGSVMEGILTGFKMHCRGWKSAYFIPKRAAFKGFAPVNLSDQLCEILRRALGSVEIFFSRHCPMWYGFKGKLKWLQRLAYTNTIVYPITSIPLLIYCTIPAICLLTGKFIIPTLTNLDSIWLMALFISIILTCALELRWSGVSIHDWWRHEQLWIIGGVSSHLFAVFQGLLKVVTGADTDFVVRPKTTSHTGFYLLKWTSLLIPPTTLVILNVVGIVAGISDAVNNGYDSWGPLFGKLFLAFWVIMHLHPFLKGLMGKQNRTPTIVVLWSLIVALVLSLLWVRIDPFLPKQTGPVLKQCGVEC 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0532 906 MobiDBLite consensus disorder prediction 51 69 - -
Lele16g0532 906 MobiDBLite consensus disorder prediction 23 41 - -
Lele16g0532 906 Pfam Cellulose synthase 166 899 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele16g0532 906 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 71 870 - -
Lele16g0532 906 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 319 467 IPR029044 -
Lele16g0532 906 SUPERFAMILY Nucleotide-diphospho-sugar transferases 332 460 IPR029044 -
Lele16g0532 906 Coils Coil 264 284 - -
Lele16g0532 906 MobiDBLite consensus disorder prediction 23 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0532 Lele-ChrLele16 2942384 2947223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0532 54 906 Cell Wall Biosynthesis AT5G17420 63.594 0.0 1135