Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0526 ATGGGGGACAGGATCAGAGCAGATAGGAAAGCCAACACCAACAAGGGTGTGTGGAAGGTAATGAAGTGCTTATGCTCAGAGGAGCCTTCAAGAGAAGAAGATGATACGGTTCCTTCATCTGAATCTCTTGCAAGCAAGGGTCATTCAGCAAATGGCATTTCTTGTCAGACCAGTCGAATTGACAAGAAGCCAGATACTAGCAATATCGAGGAAGTTGAATCATCCCTTTGTGGAAGTGATTGTTTGAATTATGAGGAAGCTAGAGCTCGTTTAGGAAAATATGAATATCAGAAAGGAAATATAGAAGCTGCTTTACATGTTTTTGAGCGAATACATACAGAGGTTGTAACTTCCAGGATTAAAAATTCTCTTTCTAAAAGGGGAAAGCATCGCAAGAGACTTTCCCAGAATTATGCTGCGCGGTCATTGTCTATTCATTCTGTTATCGTACTCTTGGAAGCATTCTTCCTAAAAGCAAAATGTTTGCAGGCTCTTGGAAAGTTCAAAGCTGCCCAATATCTTGAAGATACTGCGCCAGTTGAGCCTTTCAGATGA 555 0.4126 MGDRIRADRKANTNKGVWKVMKCLCSEEPSREEDDTVPSSESLASKGHSANGISCQTSRIDKKPDTSNIEEVESSLCGSDCLNYEEARARLGKYEYQKGNIEAALHVFERIHTEVVTSRIKNSLSKRGKHRKRLSQNYAARSLSIHSVIVLLEAFFLKAKCLQALGKFKAAQYLEDTAPVEPFR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0526 184 PANTHER PROTEIN NPG1 21 171 IPR043376 -
Lele16g0526 184 MobiDBLite consensus disorder prediction 27 65 - -
Lele16g0526 184 MobiDBLite consensus disorder prediction 40 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0526 Lele-ChrLele16 2904108 2905120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0526 21 171 Calmodulin-binding Proteins AT4G28600 47.170 1.59e-31 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1903 13 26757588 26760535 Lele16g0526 16 2904108 2905120 hybridization
Lele14g1840 14 25101481 25106816 Lele16g0526 16 2904108 2905120 hybridization