Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0521 ATGGATCATGTGATTGCTGGCAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGATCTTTTGGAGAGCTTTATTTAGGTGTTAACGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAATCTGTGAAGAGCAGGCATCCGCAGCTTCATTATGAATCAAAATTATATATGCTTCTTCAAGGAGGAACGGGAATTCCTCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTTATGGTTATTGACCTTCTTGGGCCAAGCTTAGAAGATCTGTTCAACTATTGCAACCGGAAGTTCAGCTTAAAGACGGTATTGATGCTTGCTGATCAACTAATTAACAGAGTTGAATATATGCATTCAAGAGGATTTCTTCACCGTGACATAAAGCCTGACAATTTTTTAATGGGTCTAGGGCGCAAAGCAAACCAGGTTTACATCATTGATTATGGTCTTGGAAAGAAGTTTAGGGATCTACAGACTCATAAGCATATACCATACAGAGAAAACAAGAACCTTACTGGCACAGCTCGCTATGCAAGTGTAAACACTCATCTTGGAATTGAACAAAGCCGAAGAGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGCCTTCCCTGGCAAGGTCTGAAGGCCGGCAACAAAAAACAGAAGTATGATAGGATCAGTGAGAAGAAATCCTCAACTCCAATAGAGGTTCTCTGCAAATCATACCCATCTGAGTTTGTGTCCTACTTCCACTACTGCCGATCATTACGGTTCGAGGACAAGCCAGATTATTCATATTTAAAGAGGCTTTTCCGAGACTTATTTATTCGAGAAGGCTCCCAGTTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCTCAGATGGGTGGCAGCTCAAAAGGGCGGCTTGGCAATGGCAAGGCACTTATGAATGCAGGACCATCTGTACAAAAACCGGAAAAGATCCCAGCGGGGAAAGAGATTCGAGAGAAATTTTCTGGTGGTGCTGAAGCATTTCCCCGAAGGAATCCCACAAGTTCTAGTCCTCAAGATCACACCAAAAATAGGATTTTGGAGGAGGTGCCATCACGCAGGGATGTGTATGACCAAGAAAAGGGACGCAGTTCCTCTCGATATGGAAGCACTTCAAGAAAAGCCATAATCTCATCGAACCGGCAGAGTTCCTCTGGTGACCATACTGACGGGCGTGCTGGCTGGCTGACATCAGGTGCCAACCGCCCATCTAGCACATATAGGACTCAAGCTGTGCATGAGACGAAACAACCTAGTTTTACGCGCAACGGGTCTTCAAGAGCCAATCGTGATGATGCTCTCAGGAGCTTTGAGCTCCTCTCTATTAGAAAGTAA 1377 0.4408 MDHVIAGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLESVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLGKKFRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKSSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGSQFDYVFDWTILKYPQMGGSSKGRLGNGKALMNAGPSVQKPEKIPAGKEIREKFSGGAEAFPRRNPTSSSPQDHTKNRILEEVPSRRDVYDQEKGRSSSRYGSTSRKAIISSNRQSSSGDHTDGRAGWLTSGANRPSSTYRTQAVHETKQPSFTRNGSSRANRDDALRSFELLSIRK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0521 458 MobiDBLite consensus disorder prediction 377 405 - -
Lele16g0521 458 MobiDBLite consensus disorder prediction 306 445 - -
Lele16g0521 458 CDD STKc_CK1_delta_epsilon 8 281 - -
Lele16g0521 458 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lele16g0521 458 MobiDBLite consensus disorder prediction 356 376 - -
Lele16g0521 458 MobiDBLite consensus disorder prediction 412 441 - -
Lele16g0521 458 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Lele16g0521 458 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0521 458 MobiDBLite consensus disorder prediction 325 339 - -
Lele16g0521 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lele16g0521 458 Pfam Protein kinase domain 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0521 458 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0521 458 FunFam Casein kinase 1-like protein 1 330 - -
Lele16g0521 458 Gene3D Transferase(Phosphotransferase) domain 1 1 323 - -
Lele16g0521 458 PANTHER CASEIN KINASE-RELATED 9 370 - -
Lele16g0521 458 FunFam Putative Casein kinase I 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0521 Lele-ChrLele16 2885333 2889693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0521 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 4.11e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele16g0521 Pkinase 1.7e-25 CL0016