Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0514 ATGGGTCTGAGAGACATAGGGGCTTCGCTTCCTCCTGGGTTTCGTTTCTATCCGAGCGATGAGGAGCTGGTTTGTCATTACCTCTACAAGAAGATCACCAATGAGGAAATTCTCAAAGGCACTTTGGTCGAAATTGACTTGCACACATGCGAACCATGGCAGCTTCCAGAGGTGGCGAAGCTGAACGCAAGCGAATGGTACTTCTTCAGCTTCAGGGACCGTAAGTACGCAACAGGATTCCGGACGAATAGGGCGACGACATCTGGATATTGGAAAGCGACAGGGAAGGACAGGACAGTGCTGGACCCAATGACGCGCGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCCCCCAATGGTATGAAAACTGGTTGGATCATGCACGAATTCCGCTTGGAGACCCCACACGTGCCCCCCAAGGAGGACTGGGTTTTGTGTAGGGTATTTCACAAAAGCAGAGCAGACAACGGTACCAAACTCAGCCCACAGGATATGTTTGAGACTGCACCTTCGTTTAGTTTTCCTTCTTCGTCTCCAAACAATCAAATAGAGCCTCCTGCCTTCAACACTTTCACCTCCATGCCACCCCTTCATGATTACCAGTACCAGAACCATAACAGTTCTCTAATGAATCTCCTTCAATTTTCTAGGGAAACAAACACCGGCACTACTGTTGTCAGTCAAAGTATTCCAAAAGGCGATCATGTAGGATATGACGATGAGTTCTTATGGGACATGGGCCTGGAAGAAAACAGCATCCACCACCACAATGACGTGGCATCAAACAAGGACGGAATGAGATTCGAAGCTGATAATGATAGTATGGTTTTTTTATAA 852 0.4789 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEILKGTLVEIDLHTCEPWQLPEVAKLNASEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPMTREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHVPPKEDWVLCRVFHKSRADNGTKLSPQDMFETAPSFSFPSSSPNNQIEPPAFNTFTSMPPLHDYQYQNHNSSLMNLLQFSRETNTGTTVVSQSIPKGDHVGYDDEFLWDMGLEENSIHHHNDVASNKDGMRFEADNDSMVFL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0514 283 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Lele16g0514 283 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Lele16g0514 283 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Lele16g0514 283 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 211 - -
Lele16g0514 283 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0514 Lele-ChrLele16 2847436 2850071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0514 6 180 NAC Transcription Factor Family AT1G56010 53.552 1.03e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele16g0514 NAM 1.6e-37 No_clan