Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0513 ATGAACTTCATTGAAGCAAAGAGACGAGAAGGAGATCCACCCACCACTACCTTCGATCTTCAAACCCAAACCCTCAAGTTTCCTATGAATTCCCTTCAACAATTCATGGACACTTCTTGTCACTCCGAAAGCAAACTCCCCACCAACACCATCGCGGCCCCCACCGGCGCCGCCACCTCTTCCACCAGCAACACCACCGCCAGCAGCAGCAGCAGTCGCTACGAGAACCAAAAGCGCCGCGACTGGAATACCTTCGGTCAGTACCTCAAGAACCACCGTCCCCCTCTCTCCCTTTCCAGATGTAGCGGTGCACACGTACTTGAATTTCTAAGGTACCTGGACCAATTTGGTAAGACCAAAGTGCACATACCGATGTGTCCATTTTATGGGCACCCGAACCCTCCGGCACCATGTCCGTGCCCTCTGCGGCAAGCGTGGGGGAGTCTGGATGCGCTCATCGGTCGGCTACGAGCGGCTTTCGAAGAGAACGGAGGGAAACCGGAAGCTAACCCATTTGGAGCTCGAGCTGTGAGACTGTACCTGCGTGAGGTTCGCGATCTGCAGTCGAAAGCAAGAGGTATTAGCTATGAAAAGCATAAGCGAAAGCGTCGTCCTCCTCCGCAACAACAGCAGCAGCAGCAGCAAGACTCCCTGCTTCCACCTCCAGTCGTGCTGTAA 678 0.5457 MNFIEAKRREGDPPTTTFDLQTQTLKFPMNSLQQFMDTSCHSESKLPTNTIAAPTGAATSSTSNTTASSSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHIPMCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKHKRKRRPPPQQQQQQQQDSLLPPPVVL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0513 225 MobiDBLite consensus disorder prediction 191 225 - -
Lele16g0513 225 MobiDBLite consensus disorder prediction 46 77 - -
Lele16g0513 225 Pfam ALOG domain 65 186 IPR006936 -
Lele16g0513 225 ProSiteProfiles ALOG domain profile. 73 200 IPR006936 -
Lele16g0513 225 MobiDBLite consensus disorder prediction 46 73 - -
Lele16g0513 225 PANTHER PROTEIN G1-LIKE2 55 213 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0513 Lele-ChrLele16 2832267 2833913 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2370 13 29378333 29380617 Lele16g0513 16 2832267 2833913 CCT
Lele14g2298 14 27711289 27713573 Lele16g0513 16 2832267 2833913 CCT
Lele15g0050 15 302939 306946 Lele16g0513 16 2832267 2833913 CCT
Lele16g0053 16 342015 345631 Lele16g0513 16 2832267 2833913 CCT
Lele13g1917 13 26836517 26837320 Lele16g0513 16 2832267 2833913 hybridization
Lele14g1852 14 25178068 25179743 Lele16g0513 16 2832267 2833913 hybridization