Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0511 ATGACTGGTGGCACTAGCGGTGGAATGGAGGCTAGGTCAAAACAGTGGGATGACAAAAAGATTGAAGGCCTTAAGAAAAAGAAAGAGCAGTATGAATCAGAGTTGGAAGAGGTAGGATCGATAAGAGATATGCACCTTAAGGAGTCTGAAGCCTCTGGAAAAATTAGTGGACTTGAAAAGAAAATTAAATATGCTGACATTGAGAAGAAAAGCATTGAAGACAAGCTTTCAAATTTGAAGCGGGAGAAAGAGATAATTAAAGAGGAAATAGAACGGATCAGTCCAGAACTTCAGAAGTTAAATGGCACTGTTGATAAGAGGAATGCGGGCATACTTAAGCTGGAGAAGAGGATCAATGAAATTACTGATAGGATTTACAAAGATTTCAGCAAGTCGGTTGGGGTTGCTAACATTCGTGAGTATGAAGAAAATCAACTCAAGTCTGCCCAAAATGTAGCAGATGAGAGGCTAAGCTTGAGCAGCCAGCTATCGAAATTAAAATATCAGTGCGTTCATTCTCCACTTCTCCCCCCTTCCCCCTCTCGCACTTTCTTGTTGGAGTATGCACAAAATCGGGATATGACTACACGTATTAGAGAACTGGAATCTTCTTTGAGTGCTCTTGAACATGATTTAAAGCAGGTACAGCACAAAGAGGCTGAAACAAAGTTGGCAGCTGAGAAAGCTACTGAAGACATTGACCAGTTGAAGGAAGAAGTTCAGGAGTGGAAATCGAAGTCGGAAGATTGTGAGAAGGATATCCAAGAGTGGAAGAAGCGTGCTTCTTCAGCCACAACAAGCATATCTAAACTTAATCGTCAGATAAACTCAAAGGAGGCCCAGATTGAGCAGTTAATTGTGCAGAAGCAAGACATTGTAGAAAAGTGTGAACTAGAACAACTTAGCCTGCCAATTATAGAAGATCCAATGGATACTGGTACTTCAATACCAGGTCCAGTTTTTGATTTTGATCAACTAAGTAGGGCAATGAAGGATAGGAGGAAATCCGACAGGGATAAAATTGAGGTTGATTTTAATCAAAAAATGGATTCCCTGACATCTGAAATTGAAAGAACAGCACCAAATTTGAAGGCATTAGATCAATACGAGGCTCTGCTGGAAAAGGAAAGAGCTGTAACTGAAGAGTTTGAAGCCGTCAGGAAAGAGGAGAAGGAGAAGGCTGATAGGTTCAATGCAGTTAAGCAGAAGAGGTATGAGTTGTTCATGGATGCTTTCAACCACATATCCGGTAATATAGATAAGATATACAAACAACTTACAAAGAGCAACACGCATCCGCTGGGTGGAACAGCATACTTAAACTTGGAAAATGAAGATGATCCATTTCTGCATGGCATCAAGTACACTGCTATGCCCCCAACAAAGCGCTTTCGCGATATGGAGCAGCTATCTGGTGGGGAGAAGACTGTTGCTGCACTTGCTTTGCTATTCTCCATCCACAGTTACAAGCCTTCACCTTTCTTCATATTGGACGAAGTTGATGCTGCATTGGACAATTTAAATGTTGCAAAGGTTGCTGGATTTATTCGTTCGAAATCTTGTGAGGGAGCAAGGGCTAGTCAAGATGCCGATGGTGGCAGTGGCTTTCAAAGTATTGTGATATCCTTGAAAGATAGCTTTTATGACAAAGCTGAAGCATTGGTTGGGGTTTACCGTGACTCAGAGAGAAGCTGTTCGAGAACTCTGACATTTGACCTGACCAAATACCGAGAGTCCTAA 1740 0.4161 MTGGTSGGMEARSKQWDDKKIEGLKKKKEQYESELEEVGSIRDMHLKESEASGKISGLEKKIKYADIEKKSIEDKLSNLKREKEIIKEEIERISPELQKLNGTVDKRNAGILKLEKRINEITDRIYKDFSKSVGVANIREYEENQLKSAQNVADERLSLSSQLSKLKYQCVHSPLLPPSPSRTFLLEYAQNRDMTTRIRELESSLSALEHDLKQVQHKEAETKLAAEKATEDIDQLKEEVQEWKSKSEDCEKDIQEWKKRASSATTSISKLNRQINSKEAQIEQLIVQKQDIVEKCELEQLSLPIIEDPMDTGTSIPGPVFDFDQLSRAMKDRRKSDRDKIEVDFNQKMDSLTSEIERTAPNLKALDQYEALLEKERAVTEEFEAVRKEEKEKADRFNAVKQKRYELFMDAFNHISGNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGARASQDADGGSGFQSIVISLKDSFYDKAEALVGVYRDSERSCSRTLTFDLTKYRES 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0511 579 Gene3D - 400 579 IPR027417 -
Lele16g0511 579 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 1 579 - -
Lele16g0511 579 Pfam RecF/RecN/SMC N terminal domain 260 561 IPR003395 -
Lele16g0511 579 Coils Coil 369 389 - -
Lele16g0511 579 MobiDBLite consensus disorder prediction 1 21 - -
Lele16g0511 579 Gene3D - 187 304 - -
Lele16g0511 579 SUPERFAMILY Tropomyosin 191 300 - -
Lele16g0511 579 Coils Coil 191 295 - -
Lele16g0511 579 Coils Coil 62 89 - -
Lele16g0511 579 CDD ABC_SMC1_euk 458 573 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Lele16g0511 579 Coils Coil 21 41 - -
Lele16g0511 579 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 344 570 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0511 Lele-ChrLele16 2808934 2813312 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1918 13 26846591 26858234 Lele16g0511 16 2808934 2813312 hybridization
Lele14g1853 14 25190673 25204433 Lele16g0511 16 2808934 2813312 hybridization