Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0502 ATGGAAGAGGGGATGATAAGCGGCGCCAATAAGAACGGAGAGGTGAGATACAGAGGGATCCGGAGGAGGCCGTGGGGCAAGTTTGCCGCCGAGATCCGTGACCCGACCCGAAAAGGGGCTCGCATTTGGCTCGGAACCTTTGACACCGCCGAGGAGGCTGCTCGGGCTTACGACGCCGCCGCTTTTCATTTTAGGGGTCACCGAGCTATTCTCAATTTCCCCAACGAACATCACTCTCTTTATCCTCCCACTTCTTCACTGCCCCTGCCCCTGCCCTCTTCTTCCTCCTCTTCCTCTTCGACAATTCCGCCACCCGACACCGACCGCGGTGCTGTGGAGTTTGAATACTTGGACAACAACTTGCTGGATGAACTCCTCCAACAACAAGGTTACGGCCATCCTAACTTCCCCAATTGA 417 0.5588 MEEGMISGANKNGEVRYRGIRRRPWGKFAAEIRDPTRKGARIWLGTFDTAEEAARAYDAAAFHFRGHRAILNFPNEHHSLYPPTSSLPLPLPSSSSSSSSTIPPPDTDRGAVEFEYLDNNLLDELLQQQGYGHPNFPN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0502 138 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Lele16g0502 138 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Lele16g0502 138 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Lele16g0502 138 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Lele16g0502 138 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Lele16g0502 138 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Lele16g0502 138 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Lele16g0502 138 PANTHER DNA-BINDING DOMAIN 13 98 IPR044808 GO:0003700|GO:0009873
Lele16g0502 138 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Lele16g0502 138 MobiDBLite consensus disorder prediction 90 105 - -
Lele16g0502 138 MobiDBLite consensus disorder prediction 75 110 - -
Lele16g0502 138 FunFam Ethylene-responsive transcription factor 2 15 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0502 Lele-ChrLele16 2775999 2776415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0502 12 129 AP2-EREBP Transcription Factor Family AT3G23230 56.452 5.06e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele16g0502 AP2 3.2e-15 CL0081