Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0498 ATGGCCACGTACATACGTCAATTACTCAGAAGTCTCTGTTTAAATACTGATTGGAAGTACGCCGTCTTTTGGAGACTCAAACATGGGGGTCGCATGATCCTAACATGGGAGGATGGTTACTATGGCAATCCTGATGATTATGATTCTTTAGATAATGAGTGCCGCCAGAAGACCATGGAACAGTTTCAGAGTGGGTATTTTTCTCACGACCCTCTTGGGTTGGCTGTGTCAAAGATGTCATGTCATGTATATTCGTTAGGGGAAGGTATTGTTGGACAGGTAGCTCTCACTGGGAAGCACCAGTGGATCTATGCAGATGATCATGCTACGAGTTCTGGTTTGTCCTTTGAGTTTGCTGATGGATGGCAATCTCAGTTTTCTGCTGGAATTAGGACAATTGTTGTTGTAGCTATTACCCCACATGGAGTTGTTCAACTTGGCTCCTTAAATAAAGTGATTGAAGATACGAGAGTCGTAACTCATATCAGAAATATTTGTTTGGCCAGTCAAGATTACTCGCTAGGCCCTGTTCCCAATCATAGACAATGCAGTGTGAAGAATTCTTCTTCGCCAGATGCACCAACAGCAAAACTGTCTTCAGAAATTGGACCTGCTTGCTCACATGATGCAGAGGAAACCGCAAGGGTTGAAAAACTGGGTGTTTTAATGCCCTTTACATGTTCTGCAAAGAACCTTCCACCTCCTTCTGTTTATCAGAAAATGGCTGTTGATGTGACCAAATATGGAGGGCCTGAGTTTTGCAGTAATGAAAGTTCGGTTTTGCTCAAGTCAGTATCAAATATGATGGATGTGGAGCATCAGAAATTTGTAGATATGAGACCTCTAAATGAGAAGTTTGAAGGGAGCAGTAGTGGATCCAAAGATATTAGGGTGGAATCAGAAAGAAATGTTACATCCTTGCTACACAATTCAGTTATGGATAATAACTTCAGTGATTCTGTAGGTCCATGTGAAAAAATTGGAGCTGGTTTTGCCTGCTTGCCTTCGGAGTTTCATGATGTTGTTTGTCAATGTGATAAGTTGCGTTATTTAAATATTAGCCAGAAAGAGGCGTTGACTCTTGCCAGATCTTCAGATGCAAGCTCCCGAAAATATACAGAAAAGTCAGAGTTTCAGACTGCACTTTCTTACAACAGTACCTCAAATGCAATGTCGAAATTCCCTGCTGGCTGTGAGCTACATGAAGCCCTTGGACCAGCTTTTGTGAAAAGTGGATATTTTGATCCAGGAGGACAGGTGAATGAGGATCTTACAATGATGGAGATGCCGGATGAGATTAGCCGTAGCCAGTTGACTCATGAATCTTGTCCGGAGCATCTTCTGGAAGCAATAGTAGCCAATGCTTGTCATAGTAATAATGACATTAAGAGTGAACTATCATACTCTGCATCAGTGCAGTCTGCAATGATATCTGAAAGAAATCCTGAAGCTTCCATGCACACAGCCCCTGCTATTAACTCAGAAGGCTATTCAATAGAGTCTTCTCTTGTAAGAGAGGACATATTCCACTCTTTGACTTCATCATCATGTCCTAGTTCATGTAGTGAACGGTTTGAAAGATCTTCTGAACCTGGTAAGAACAAGAAGAGGGCTAGGCCTGGAGAAAGTGGTAAGCCTAGGCCAAGGGACAGACAACTGATCCAAGATCGTATTAAGGAGTTGAGAGAATTGGTGCCAAATGGGGCAAAGTGCAGTATTGATTCATTACTGGAGCGCACAATAAAGCACATGCTCTTTCTGCAGAGCATTAGTAAGCATGCTGACAAGCTAAATAAATTTACTGGTTCAAAGACAAAGTTGCATCACTTGAAATCAGCTGTTCCTGGACCCTCTAGCTATGAACAGGGTTCGAGTTGGGCAATGGAAGTAGGCGGTCATTTGAAAGTTCATTCAATACTAGTGGAGAATCTTAGTAAGAATGGACATATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTGGAGATAGCAGAAGCCGTAAGAAGCTTGGGCCTGACAATTTTGAAAGGTGCAACAGAAGCTCATAGTGAGAATACATTGATATGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTACACAGGTTGGATATATTGTGGCCGCTTGTTCAAATACTGCAGTCCAAGAGTGCAATGCATGAATAA 2172 0.4213 MATYIRQLLRSLCLNTDWKYAVFWRLKHGGRMILTWEDGYYGNPDDYDSLDNECRQKTMEQFQSGYFSHDPLGLAVSKMSCHVYSLGEGIVGQVALTGKHQWIYADDHATSSGLSFEFADGWQSQFSAGIRTIVVVAITPHGVVQLGSLNKVIEDTRVVTHIRNICLASQDYSLGPVPNHRQCSVKNSSSPDAPTAKLSSEIGPACSHDAEETARVEKLGVLMPFTCSAKNLPPPSVYQKMAVDVTKYGGPEFCSNESSVLLKSVSNMMDVEHQKFVDMRPLNEKFEGSSSGSKDIRVESERNVTSLLHNSVMDNNFSDSVGPCEKIGAGFACLPSEFHDVVCQCDKLRYLNISQKEALTLARSSDASSRKYTEKSEFQTALSYNSTSNAMSKFPAGCELHEALGPAFVKSGYFDPGGQVNEDLTMMEMPDEISRSQLTHESCPEHLLEAIVANACHSNNDIKSELSYSASVQSAMISERNPEASMHTAPAINSEGYSIESSLVREDIFHSLTSSSCPSSCSERFERSSEPGKNKKRARPGESGKPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSISKHADKLNKFTGSKTKLHHLKSAVPGPSSYEQGSSWAMEVGGHLKVHSILVENLSKNGHMLVEMLCEECSHFLEIAEAVRSLGLTILKGATEAHSENTLICFVVEGQNNRNVHRLDILWPLVQILQSKSAMHE 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0498 723 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 164 IPR025610 -
Lele16g0498 723 MobiDBLite consensus disorder prediction 513 553 - -
Lele16g0498 723 MobiDBLite consensus disorder prediction 526 553 - -
Lele16g0498 723 MobiDBLite consensus disorder prediction 183 202 - -
Lele16g0498 723 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 538 587 IPR011598 GO:0046983
Lele16g0498 723 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 721 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0498 Lele-ChrLele16 2756650 2761452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0498 1 719 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.974 4.83e-156 468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1260 06 8020091 8022201 Lele16g0498 16 2756650 2761452 CCT
Lele07g1463 07 8898844 8901898 Lele16g0498 16 2756650 2761452 CCT
Lele08g1252 08 7959544 7961669 Lele16g0498 16 2756650 2761452 CCT
Lele05g1398 05 8832877 8838981 Lele16g0498 16 2756650 2761452 CCT
Lele13g1930 13 26912682 26917817 Lele16g0498 16 2756650 2761452 hybridization
Lele14g1863 14 25243691 25249102 Lele16g0498 16 2756650 2761452 hybridization