Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0494 ATGGCTTCTGCGGCTGGCTCTGGCTCTTGTTCTCCCTGCGGGGCTTGCAAATTCCTCAGAAGAAAGTGCGCCGCCGACTGCATATTTGCGCCCTACTTCTGGTCCGATCAAGGCCCTGCCAGATTTGCCACCATTCATAAGGTGTTTGGGGCTAGCAATGTTTCTAAATTGCTCTTGCATATACCCGCTCGTGATCGCTGTGACGCCGTCGTCACTATTGCTTATGAAGCCCAGGCTCGGATTAGAGACCCTGTTTATGGCTGTGTCGCTCACATTTTTGCCTTGCAACGACAGGTGGCGTGCTTGCAGGCACAACTGATGCAAGTGAAGGCTCAACTGGCGCAGAAGAACCTAATGGAAAGCAGGAACTTTGAAAACCAGTGGACAAATCATAATATTGAGGGTGGTCAAGCAATGAATGCATACAACACGAACCCTATATCTCCTCAGAGCTCTCTCGAGTCAATTGACCACAACATGGGTGATGGAATAAATAACATGCAAGATATACGAAGTAGAGAGGAATTTCCATTCCCTAAAAGAAGATCTCATAACTATGATTTGGGTGAGCTCCATCAGCTTGCGCTCAGGGTGATGAGGAACTAG 606 0.4835 MASAAGSGSCSPCGACKFLRRKCAADCIFAPYFWSDQGPARFATIHKVFGASNVSKLLLHIPARDRCDAVVTIAYEAQARIRDPVYGCVAHIFALQRQVACLQAQLMQVKAQLAQKNLMESRNFENQWTNHNIEGGQAMNAYNTNPISPQSSLESIDHNMGDGINNMQDIRSREEFPFPKRRSHNYDLGELHQLALRVMRN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0494 201 Coils Coil 92 112 - -
Lele16g0494 201 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
Lele16g0494 201 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 160 - -
Lele16g0494 201 Pfam Lateral organ boundaries (LOB) domain 12 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0494 Lele-ChrLele16 2727967 2728865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0494 7 201 AS2 family AT2G42430 52.321 1.13e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele16g0494 LOB 5.1e-37 No_clan