Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0492 ATGTATGCAGCCGAGCTTTATATTGAGAAAATGGAGGATGTTCAGGGTATTTCGGAAAACATTGTTGTTGGTTCTCACATTTGGGTTGGTGATCCAGAACAAGTTTGGATTGACGGAGAAGTACTGAAAATCAATGGAGAGGAAGTTGAGGTTCAAACTAGTTCTGGGAATAAGGTTGTTGCCTGTTTGTCAAAATTATATCCCAAGGATGCAGATGCTCCTGTTGATGGAGTTGATGATATGACCAAGCTTGCTTATTTGCATGAGCCAGCAGTGCTTCATAATTTAGCAACTAGATACAAGATGAATGAGATATATACTTACACCGGAAATATTCTTATTGCTGTCAATCCCTTTCAAAATCTTCTGCACTTGTATGACACTGATGTGATGCAACAGTACAAGGGAGCTATGCTTGGAGATTTAAGCCCTCATGTATTTGCCATTGCTGAAGCTGCATACAGGGCAATGGTCAATGAGGAGAAAAGCAATGCTATTCTTGTTAGTGGTGAGAGTGGAGCTGCGGAAGGAAGTAGTGTTGAGCAACAAGTTTTAGAATCAAACCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGAAAATTTGATGCAATTTTCAGAGTTGTGGCTGCCATTCTTCATCTTGGAAACATTAAGTTTGAAAAATCAGAAGAAGACTCGTCAGTTTTAGCAGATGAAGAATCTAAGTACCATCTCGAAATGACAGCAGAACTTCTCAAGTGTGTTCCAAGTGCTTTGGAAGATGCACTTTGTAAGCGTATGATGATTACCCCAGAGGAAGTCATTAAGAGAAGTCTTGATCCTCTTGCTGCGACAGTTAGCAGGGATGGTTTAGCCAAGACATTATATTCTCGCTTATTTGACTGGTTAGTCAAAAAAATTAATGTCTCCATTGGGCAGGACCCCAGCTCAAAATGTATCATTGGAGTTCTTGACATATATGGCTTTGAAAGCTTTAAAACTAATAGTTTTGAGCAGTTTTGTATTAATTACACAAATGAAAAGCTGCAGCAACACTTCAACCAGAAACCAGGTGGAATCATTTCTCTGCTTGATGAGGCATGGTATGATGAAATTCCTGTACTTTTGGTATATTACTTTGTGGCTGTTAATTTGATCTTTCGTGATTTTTTGACTCGAGTGGCTCTTCTTGCTCCAGAGATTGTCAAAGAAAAGTATGTGTACCTTAACCCAGGTTATGTTTATATGAACTTTTTACCAAGCAGTCTCAATGTGACGCCATATTCTGACATTTACTTGGTTTTTGGACTTGAAAACAATCCTCATCTAAGCAGTTCTGATGAGAAAGATTCATGTATAAAGATTTTGCAGAAGATTGGCCTTACAGGGGAATCAAAGATATTCTTGAGAGCTGGTCAGATGGCTGAGTTAGACGCTCAAAGGGCACTCCTCCTTAACAACTCCGCTATTGTTATCCAGAAACGGATCAAAACTCATCTGAATCAGAAAAGATATCTTACATTGCAAAAGTCTTCTGTCTGCGTGCAATGTTTTTGTAGAGGAGAAATGGCTCGGAGATCATATTATCTCATGAAGAGAAATGCAGCTGCTGTCAGAATTCAAAGGAATATTCGTGGAAAACTAGCCAGGAAAAAGTACAACCAAATATATACTTCTGCCATTGTATTTCAGACAGGCTTTCGGGCTATGGCAGCTCATGATGAATTGAGATATAGACTGGAAGCTAGTGCATCAATTAAACTTCAGGTTGCACAGAGAGCAGTTGAAATGGAAAGCCAGGTTGTGGAGAAAGCAGAGGAAATGGAAAGCCAGATTGTGGAGAAAGCAGTGGAAAATGAAAGCCCTTGTGCGAAAGTCTCCATAAATCATTGTATAGATACTGAAAGCATTCATGCTATCAAAGAGTGCTCAAGTCCTTTCCAAGACTCTGAAAAGATTGAGGCTCTTACTTCAGAAGTCATAAATTTAAAGGTTATGTTGCATGCAGAAAAACAAAGAGCTGATGATTGTGAAAGGAAATATGTGGAAGCCGAAGAATCTAGAGAGGAGTTACGCAAAAAGCTAGCAGAAACAGAAAAAAGAGTATATCAGCTTCAAGACTCATTGAACAGGATGATATCTTCCATGTCAAGCCAAGTTGCGGAACTGAAATTGATATTAAGTACTTCATCAAGACTAAGTTCAACTTTTCGGCCTATTGCTAGAGTGGATGTTGCTTCCAGCAACTCTGATACTTCATCCACAGATTCTGATTTCACAGCTTCAGTTCCTGCTTCAAATACAACCAATCAGTCTAACTCCCAGCCTAGTGCTATTCAGCTAGTTGTTCAGGGTGTCACTGTAGCTGATGGTTCAGGTCAGTCCAGTTTTGTTGTAAATGTCATTGTCCTAGATATTTTTCCATTTAATTTGCTTGCTGAGTTCAGAAAACTATGCATATATGAGGAGGAATATAAGTTGTGTTTGACCGTACCATTTGTTTTCCTTATTGTTGCACTTGCAGGATGCGAATCTGAAAAGGGAGGGGCATTTGATGATTTCTTCTAG 2577 0.3919 MYAAELYIEKMEDVQGISENIVVGSHIWVGDPEQVWIDGEVLKINGEEVEVQTSSGNKVVACLSKLYPKDADAPVDGVDDMTKLAYLHEPAVLHNLATRYKMNEIYTYTGNILIAVNPFQNLLHLYDTDVMQQYKGAMLGDLSPHVFAIAEAAYRAMVNEEKSNAILVSGESGAAEGSSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFDAIFRVVAAILHLGNIKFEKSEEDSSVLADEESKYHLEMTAELLKCVPSALEDALCKRMMITPEEVIKRSLDPLAATVSRDGLAKTLYSRLFDWLVKKINVSIGQDPSSKCIIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQKPGGIISLLDEAWYDEIPVLLVYYFVAVNLIFRDFLTRVALLAPEIVKEKYVYLNPGYVYMNFLPSSLNVTPYSDIYLVFGLENNPHLSSSDEKDSCIKILQKIGLTGESKIFLRAGQMAELDAQRALLLNNSAIVIQKRIKTHLNQKRYLTLQKSSVCVQCFCRGEMARRSYYLMKRNAAAVRIQRNIRGKLARKKYNQIYTSAIVFQTGFRAMAAHDELRYRLEASASIKLQVAQRAVEMESQVVEKAEEMESQIVEKAVENESPCAKVSINHCIDTESIHAIKECSSPFQDSEKIEALTSEVINLKVMLHAEKQRADDCERKYVEAEESREELRKKLAETEKRVYQLQDSLNRMISSMSSQVAELKLILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTASVPASNTTNQSNSQPSAIQLVVQGVTVADGSGQSSFVVNVIVLDIFPFNLLAEFRKLCIYEEEYKLCLTVPFVFLIVALAGCESEKGGAFDDFF 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0492 858 Pfam Myosin N-terminal SH3-like domain 24 60 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele16g0492 858 ProSiteProfiles Myosin motor domain profile. 76 358 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele16g0492 858 Pfam Myosin head (motor domain) 78 211 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele16g0492 858 Pfam Myosin head (motor domain) 213 358 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele16g0492 858 PANTHER MYOSIN 388 780 - -
Lele16g0492 858 Gene3D Kinesin motor domain 26 175 IPR036961 -
Lele16g0492 858 Gene3D Kinesin motor domain 176 213 IPR036961 -
Lele16g0492 858 ProSiteProfiles IQ motif profile. 536 562 IPR000048 GO:0005515
Lele16g0492 858 Gene3D Myosin VI head, motor domain, U50 subdomain 214 338 - -
Lele16g0492 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 537 IPR027417 -
Lele16g0492 858 PRINTS Myosin heavy chain signature 189 216 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele16g0492 858 PRINTS Myosin heavy chain signature 106 125 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele16g0492 858 MobiDBLite consensus disorder prediction 750 777 - -
Lele16g0492 858 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 22 71 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele16g0492 858 Gene3D - 339 361 - -
Lele16g0492 858 ProSiteProfiles IQ motif profile. 511 540 IPR000048 GO:0005515
Lele16g0492 858 Gene3D - 427 483 - -
Lele16g0492 858 Coils Coil 670 711 - -
Lele16g0492 858 SMART iq_5 535 557 IPR000048 GO:0005515
Lele16g0492 858 SMART iq_5 510 532 IPR000048 GO:0005515
Lele16g0492 858 SMART iq_5 487 509 IPR000048 GO:0005515
Lele16g0492 858 Coils Coil 591 611 - -
Lele16g0492 858 Pfam IQ calmodulin-binding motif 490 508 IPR000048 GO:0005515
Lele16g0492 858 Pfam IQ calmodulin-binding motif 538 556 IPR000048 GO:0005515
Lele16g0492 858 Pfam IQ calmodulin-binding motif 513 531 IPR000048 GO:0005515
Lele16g0492 858 Gene3D - 538 590 - -
Lele16g0492 858 Gene3D - 488 537 - -
Lele16g0492 858 SMART MYSc_2a 70 486 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0492 Lele-ChrLele16 2706383 2719452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0492 430 701 Myosins gene family AT1G08730 34.397 3.04e-37 149