Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0487 ATGCCTCTCCATCCACAATCCCTCAAATCCTCCATTGCCTACCATGCACCTTCCTTACCACCCACATGTCGTCGAAACCCTTCCCTAATTTTCCCTTTCTCTCGCCCTCACTCCGTTTTCGCCCGCAACGGCGTCCAAATCTCGTTGCCCAAACTCTTCTCTGCCTCAATCGCCTCTGTTCCCTACGCTGCCGAAAACGATTGGAAGTTGAGGGGTTCTGGAATCAAGGATAACGATGTTGCTACCCTGGGGAACCTCTGTGTCGACATTGTGCTCAATGTCCCTCAGTTGCCGCCTCCCTCAGTCGAGGAACGCAAGGCATTTATGAAACAGTTATCGGCTTCTCCACCTCACAAGAAACACTGGGAAGCTGGCGGGAACTGCAATATGGCTATAGCAGCATCAAGACTGGGACTTGAGTGCATTGCAATTGGTCAAGTGGGTAATGAGGTATATGGGAAGTTTTTGCTTGATGTGCTTAATGATGAGGGCATTAGGATGGTACAAATGAGTGATAATGCTGATGTTGCCAACAACTCTAGTCCCTCGTATGAAACACTCCTGTGCTGGGTTCTTGTAGATCCTTTACAAAGACATGGTTTTTGTAGTCCGGCTGATTTTAGCAAGGAGCCTTTATTTCACTGGATGAAGCAATTGTCTACAGAAGTAAAGGTGGCTATTAAAAAGTCAAAGGTCTTATTTTGTAATGGATATGGCTTCGATGAGCTCTCTCCTGGTTTACTACTTTCAACAGTGGGATATGCTGTTGAAGCCGGTACAGCAGTTTTCTTTGATCCTGGGCCACGTGGAAGGAGTCTTTCAACTGGGACACCGGAAGAACAAAGAGCCCTTTACCAGTTTCTGAGGATGAGTGATGTTCTTCTTCTAACTTCTGATGAGGCTGAGTCATTAACTGGCATAGGAAATCCAATATTAGCAGGGCAAGAGTTGCTTAAAAGAGGGATCCGCACAAAATGGGTGATTGTGAAAATAGGTTCCAGAGGTTCGATCCTGATATCTAAGTCGAGTATAGCTTGTGCACCTGCATTCAAGGCCAATGTTATTGACACCGTTGGATGTGGGGACAGTTTTGTGGCTCCCATTGCTTATGGTTTTATAAATAAGATGCCAATGGCTAATACGTTGGCAATTGCAAATGCAGTTGGGGCTGCCACTGCTATGGGTTGTGGTGCTGGTAGGAACGTAGCTACACTGGATAAAGTTACAGATATACTGCGATCATCAAACCTTAACGTAGATGATGAATTTTGGACTGACCTACTTGAAAAGAACGTGGATGCTCAGGAAATAGTATTTCTGTCAAATGATGTGATCATCGGAAAAAGGAATCAGCTCAAACACGTCTCCTTCGATAAGGTTGCCTCTGAATTGTTGCCCAGGTTCATGTTTCCCCAGCTAGAGGAGAAAGTGCTTTCTTGA 1440 0.4549 MPLHPQSLKSSIAYHAPSLPPTCRRNPSLIFPFSRPHSVFARNGVQISLPKLFSASIASVPYAAENDWKLRGSGIKDNDVATLGNLCVDIVLNVPQLPPPSVEERKAFMKQLSASPPHKKHWEAGGNCNMAIAASRLGLECIAIGQVGNEVYGKFLLDVLNDEGIRMVQMSDNADVANNSSPSYETLLCWVLVDPLQRHGFCSPADFSKEPLFHWMKQLSTEVKVAIKKSKVLFCNGYGFDELSPGLLLSTVGYAVEAGTAVFFDPGPRGRSLSTGTPEEQRALYQFLRMSDVLLLTSDEAESLTGIGNPILAGQELLKRGIRTKWVIVKIGSRGSILISKSSIACAPAFKANVIDTVGCGDSFVAPIAYGFINKMPMANTLAIANAVGAATAMGCGAGRNVATLDKVTDILRSSNLNVDDEFWTDLLEKNVDAQEIVFLSNDVIIGKRNQLKHVSFDKVASELLPRFMFPQLEEKVLS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0487 479 SUPERFAMILY Ribokinase-like 79 417 IPR029056 -
Lele16g0487 479 Gene3D - 77 414 IPR029056 -
Lele16g0487 479 PANTHER OS03G0164700 PROTEIN 4 477 - -
Lele16g0487 479 Pfam pfkB family carbohydrate kinase 115 398 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0487 Lele-ChrLele16 2674958 2678614 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0487 16 2674958 2678614 Lele13g2267 13 28790602 28795113 CCT
Lele16g0487 16 2674958 2678614 Lele14g2203 14 27134674 27137374 CCT
Lele16g0487 16 2674958 2678614 Lele15g0145 15 870825 875340 CCT
Lele13g1945 13 27016869 27020791 Lele16g0487 16 2674958 2678614 hybridization
Lele14g1873 14 25330446 25334095 Lele16g0487 16 2674958 2678614 hybridization