Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0481 ATGCCTAATTACAGCTCGCTTCCTTCAACCTCCGATACCGCTGGTTCTTACCTGGGCGCACGCGTCACGACAGCAGCTCAATCCGTTTTCGCCACGCGCCGCCCATGGGAGGAGGTCTTCGCTCTTTACTCCTTCAATCGTCCGTTCACCTTTGGAGAAGCCACCATGCGCATAAAGCGCAACCTCAGTCACTTCCGCGTCAATTACGCCCTTATTGTCCTTGTAATTCTCTTCCTAAGTCTTCTCTGGCACCCAATATCGATGATTGTCTTCTTGGTGGTGTTCGTTGCCTGGTTCTTCCTCTATTTCTTTCGGGACGAGCCGGTGATGGTTTTCAATCGCCAAATTGATGACCGGGTGATGCTGGTTGTGCTTGGGTTGGTGACCATTGTGGCCTTGATTCTCGCTGGCGTTTGGTTGAATGTCTTGGTTTCAATTTTGATTGGGGTTGCAGTTGTTGGACTGCACGCGGCGTTTAGGAGCACGGAAGATTTGTATGTGGATGAGCAAGAGGCCGCCGATGGAGGGTTACTCTCAGTTGTAGGTAGCCCCCCCAAGCGAACAGGGTACACCAGGGTTTAG 582 0.5206 MPNYSSLPSTSDTAGSYLGARVTTAAQSVFATRRPWEEVFALYSFNRPFTFGEATMRIKRNLSHFRVNYALIVLVILFLSLLWHPISMIVFLVVFVAWFFLYFFRDEPVMVFNRQIDDRVMLVVLGLVTIVALILAGVWLNVLVSILIGVAVVGLHAAFRSTEDLYVDEQEAADGGLLSVVGSPPKRTGYTRV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0481 193 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 15 171 IPR004895 -
Lele16g0481 193 Pfam PRA1 family protein 30 170 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0481 Lele-ChrLele16 2636521 2637102 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1481 07 9032793 9037476 Lele16g0481 16 2636521 2637102 CCT
Lele16g0481 16 2636521 2637102 Lele16g0481 16 2636521 2637102 ECH
Lele13g1951 13 27052421 27055365 Lele16g0481 16 2636521 2637102 hybridization
Lele14g1880 14 25379206 25379787 Lele16g0481 16 2636521 2637102 hybridization