Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0475 ATGGAATCTATCTATCACATTCCTTATAAGACTCTTTCATGGAATGTTCGTAGAGCGTGTTATCCCTCAGAAACAAAGACAAGTAATGGCCTGGCAAAATCCGTGTCCTACTTTCTCCAAGGTGGTTCCACAATGGAAATCTCATCCACTTCAATCACGCCAGGAAGAGGTCGGATATGTCCTTTGGCAGGGCCTTTGCACCGAGGAAGAGTTAAGACGCGTGAGTGGAATCCTTGCTTACCGTCTATCGGGCGACCTAAGAATTTTGTGCAACTATCGTTTGGGCAAACTTGCTATTGGAAAAGGAAGGATGCGCACTTCCAGGTTTTATGTAGTCAAATGGGCGAAAGGGGAGTTGTTCACGTAGTAGAGGGCAGTTGTATTGATGAGATATATGATGCACTGGCTAAACGTCTTCTACCTACAGCAGCAGCAGCGACGTCAAACTCTAATCTTAAATATTTGGTTGGTCTGGCTGGTCTTCCTGGTGCCGGAAAAAGTACTCTAGCACATGAAGTAGTTAGTCGTATAAACAGATTATGGCCAGAGAAATCTTCTTCATTAGATTCTCAGGTCAAGCCTCCTGATGTTGCAACAGTGGTTCCGATGGATGGTTTTCACCTTTATCGTTCTGAACTAGATGCAATGGAGGACCCACAGGAAGCGCATGCCAGAAGGGGAGCTCCATGGACATTCAATCCGTCACTCTTGCTTACATGCCTCAAGAATTTAAGAAGTCAGGGATCAGTGTATGCACCATCATTTGACCATGGTGTTGGAGACCCTGTGGAAGATGATATTTTTGTGAATCTTCAGCACAAAGTGGTTATTGTAGAAGGTAACTACTTGCTCTTGGAAGATGGCATATGGAAGGAGTTATCATCTTTGTTTGACGAGAAGTGGTTTATTGATGTGGACATTGACAAAGCCATGCAGCGAGTTTTAAAGAGACATATATCAACCGGCAAGCCCCCGGACGTTGCTAAATATCGAATAGAGTACAATGACCGGCCCAATGCAGAGCTTATTATGAAGTCCAAAATTAATGCTGATCTTGTAATTAAATCAGTTGATTTCTGA 1080 0.4361 MESIYHIPYKTLSWNVRRACYPSETKTSNGLAKSVSYFLQGGSTMEISSTSITPGRGRICPLAGPLHRGRVKTREWNPCLPSIGRPKNFVQLSFGQTCYWKRKDAHFQVLCSQMGERGVVHVVEGSCIDEIYDALAKRLLPTAAAATSNSNLKYLVGLAGLPGAGKSTLAHEVVSRINRLWPEKSSSLDSQVKPPDVATVVPMDGFHLYRSELDAMEDPQEAHARRGAPWTFNPSLLLTCLKNLRSQGSVYAPSFDHGVGDPVEDDIFVNLQHKVVIVEGNYLLLEDGIWKELSSLFDEKWFIDVDIDKAMQRVLKRHISTGKPPDVAKYRIEYNDRPNAELIMKSKINADLVIKSVDF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0475 359 PANTHER URIDINE KINASE 145 353 - -
Lele16g0475 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 356 IPR027417 -
Lele16g0475 359 Pfam Phosphoribulokinase / Uridine kinase family 156 357 IPR006083 GO:0005524|GO:0016301
Lele16g0475 359 Gene3D - 180 359 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0475 Lele-ChrLele16 2600078 2608004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0475 198 317 PRT Gene Family AT3G27440 30.328 2.01e-06 47.4