Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0474 ATGGAAGTTATTGGGCTGAAGAAGCAGGAGAAAATGGGGTTTGAGGAGACGGAGCTGAGGCTTGGACTGCCCGGAAATGGAGGCTCTGCTGCTGCTGAAGGAGGAGGAGAAGCTGCGAGGAAGAGAGGATTTTCTGAGACTGAGAATACTAGCACTGTGGATTTGATACTGAATCTCTCTTCTTCCAAAGAAGCTGATCATTCCTCTGACAAACCCAACCAGAAGACCCTTCTTCTCGCCGATCCCGCCAAGCCTCCTGCCAAGGCTCAAGTGGTGGGATGGCCACCGGTGAGATCGTTCCGGAAGAACATGTTAGCTCAGAAGAAGAACGGAGAAGAGAGCGAGCAGAAAAGCAGCCCTAATAATGGAAGCTTTGTGAAGGTGAGCATGGATGGAGCTCCATATCTTCGCAAAGTGGACCTCAAGATGTACAAGAGTTATCAAGACCTCTCCGATGCCTTAGGCAACATGTTCAGCTCCTTCACCATTGGGAATTGTGGATCCCAAGGACTGAAGGATTTCATGAACGAGAGTAAGCTGATGGATCTGTTGAACAGCTCCGACTATGTCCCGACCTATGAGGACAAAGATGGCGACTGGATGCTTGTCGGTGATGTCCCTTGGGATATGTTCGTTGAATCCTGCAAGCGCTTGCGTATTATGAAAGGAAAGGAGGCTATTGGGCTTGCACCAAGAGCCATGGAGAAATGCAAGAACCGAAGCTAG 726 0.4972 MEVIGLKKQEKMGFEETELRLGLPGNGGSAAAEGGGEAARKRGFSETENTSTVDLILNLSSSKEADHSSDKPNQKTLLLADPAKPPAKAQVVGWPPVRSFRKNMLAQKKNGEESEQKSSPNNGSFVKVSMDGAPYLRKVDLKMYKSYQDLSDALGNMFSSFTIGNCGSQGLKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWDMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0474 241 MobiDBLite consensus disorder prediction 45 63 - -
Lele16g0474 241 MobiDBLite consensus disorder prediction 17 93 - -
Lele16g0474 241 Pfam AUX/IAA family 16 232 IPR033389 -
Lele16g0474 241 FunFam Auxin-responsive protein 118 233 - -
Lele16g0474 241 Gene3D - 117 235 - -
Lele16g0474 241 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 228 IPR003311 GO:0005634|GO:0006355
Lele16g0474 241 MobiDBLite consensus disorder prediction 106 125 - -
Lele16g0474 241 SUPERFAMILY CAD & PB1 domains 114 222 - -
Lele16g0474 241 ProSiteProfiles PB1 domain profile. 123 223 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0474 Lele-ChrLele16 2593819 2596440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0474 114 226 B3 DNA Binding Superfamily AT3G61830 33.628 1.45e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele16g0474 AUX_IAA 1.4e-84 CL0072