Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0473 ATGGGGATGCCCGACCAATCAATAGCATCCACGTGGGACATGCTCCCTGTTCACATGGACGTGTTCCTCCGCGAAGCCCCCGTGATCCAACGCTCCAAGATTCACTCCGCAAATTCCACCAACAGAATATCAGCCGTCCTTTGGTGGTCCACGTTCTTTAATGCCATTGGCCGTCCTTGTTCCTCCCCTGTCTCCCTCGTCTTAGACACACTCTATTATTCTCTTACGCGTCCTTCCAATGGGAAAGTCTCCACCGCCACGCGCTACCTGCTTAAACCGTGTGCGGGTGTGGGCCCCACGTGTAAAAGTCGTGCCTTGGCACCACTCGATAGGCGGATCAGAGAAATGGAGAGTTCATCATCAATATCAATGGGTGAGCTGAACCTGAAGGACACAGAGCTAAGGTTGGGATTGCCAGGAAGCGACGAGCCAGAGAAACGTTACAGTGTTGGAAGCAAAAGGAAATATTCAGCTGAGAAAACAAGTCGTGAGGAGGAATCAACAGGCAAGATTAGTGATGCTAAAAGTGATCACGCCCAGTCAGACAACGGCCCACCAGCAAAGGAGCAAGTAGTGGGATGGCCACCAGTGAGAAGTTTCAGGAGGAATAATATGCAACAAAAGAAGGAGGGAGAAGGTGGAAGGTACGTGAAAGTGAGCATGGCTGGTGCCCCATACTTGAGGAAGATAGATGTGAAGGTTCATAAGAGCTACCCAGAAGTGCTCAAGGCATTGGAAAATATGTTCAAGTGCACTTTCGGTGAATATTCAGAAAGGGAGGGATACCATGGATCTGAATATGTTCCCACATATGAAGATAAAGACGGTGACTGGATGCTTGTTGGAGATGTTCCATGGGAGATGTTCATATGCTCCTGCAAGAGGTTCAGAATCATGAAAGCATCTGAAGCTAAGGGTTTGGGTTCTCTATGA 933 0.4898 MGMPDQSIASTWDMLPVHMDVFLREAPVIQRSKIHSANSTNRISAVLWWSTFFNAIGRPCSSPVSLVLDTLYYSLTRPSNGKVSTATRYLLKPCAGVGPTCKSRALAPLDRRIREMESSSSISMGELNLKDTELRLGLPGSDEPEKRYSVGSKRKYSAEKTSREEESTGKISDAKSDHAQSDNGPPAKEQVVGWPPVRSFRRNNMQQKKEGEGGRYVKVSMAGAPYLRKIDVKVHKSYPEVLKALENMFKCTFGEYSEREGYHGSEYVPTYEDKDGDWMLVGDVPWEMFICSCKRFRIMKASEAKGLGSL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0473 310 ProSiteProfiles PB1 domain profile. 214 303 IPR000270 GO:0005515
Lele16g0473 310 SUPERFAMILY CAD & PB1 domains 212 300 - -
Lele16g0473 310 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 126 305 IPR003311 GO:0005634|GO:0006355
Lele16g0473 310 Pfam AUX/IAA family 149 308 IPR033389 -
Lele16g0473 310 MobiDBLite consensus disorder prediction 136 177 - -
Lele16g0473 310 MobiDBLite consensus disorder prediction 133 214 - -
Lele16g0473 310 FunFam Auxin-responsive protein 209 310 - -
Lele16g0473 310 Gene3D - 209 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0473 Lele-ChrLele16 2586625 2587942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0473 206 309 B3 DNA Binding Superfamily AT2G46530 33.654 6.14e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele16g0473 AUX_IAA 4.2e-53 CL0072