Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0470 ATGGACACCCACTCGTCTCACGCGGCCGGAACTATTCGCTCCCGTAGCTCCCAGTCCCCTTCTCCTTCTCACTCCGCTTCTGCATCTGCTACCTCTACTATCCACAAGCGCAAGATGGCGTCCGACGATCACGCTCCTCCTTTCCCCCCCTCCTCCTTCTCCGCCGACACCCGCGACGGCGCTTTGACCTCCAATGATGACCTCGAGAGCATTTCTGCTCGCGGCGCTGATTCCGACTCCGAAGATGAGTCCGAGGATGCCATTGTTGACGAGGAGGAGGAGGATTACGACAATGACCCCTCCATGCGCACCTTCACTGCCGCTAGGCTTGAAACCCCCCCCTCAGCTCCGCGGAATACCAAGCTCCAAAAGGATAATACGACGGTCAAGATAGAGAATTCGGATGGTGCCAAAGACGCTGCCACCGCCGGGACTGCTACCGTGGGAACCATTCCCACCTCGACCTTAGTTCCGGGCATTATGGTTAAGGAGGACGCCACAAAGATTTTTACTGATAATTTGCAGACTGGTGGGGCATACTGTGCGAGGGAAGAGAGTCTAAAGAGAGAGGAAGAAGCGGGGAAGCTGAAATTTGTATGCCTTTCAAATGATGGTGTTGATGAGCACATGGTTTGGTTGATAGGGTTGAAGAATATTTTTGCTAGACAACTTCCCAATATGCCCAAGGAATACATTGTCCGACTTGTTATGGATAGGAGCCACAAGTCTGTGATGGTTATAAGACGTAATCAAGTTTTCGGTGAGATAGCCTTTTGTGCGATAACAGCTGATGAGCAAGTAAAAGGTTACGGCACCAGACTGATGAATCACTTGAAACAGTATGCTCGTGATGGGGATGGATTGACACACTTTCTCACATATGCTGATAATAATGCTGTTGGCTATTTTATCAAGCAGGGCTTCACAAGAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTTTATAAAGGATTATGATGGAGGAATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCATACACTGATTTATCAACTATGATTTGTCGTCAGAGGCAGGCTATTGATGAAAAGATAAGAGAGCTGTCAAACTGCCACATTGTTTATACTGGATATGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAAAAATCGATCAAAGTTGAGGACATCTCTGGTCTGAGAGAGGCTGGATGGACTCCTGATCAATGGGGTCATTCTCGATTTAGAAGTTTAACTGTTTCTACAGACACCGCTACAAATCAAAAACATTTGACTTCAATGCACGATCATGCTGATGCCTGGCCATTCAGGGAACCAGTTGATGCCCGGGATGTTCCTGATTATTATGAGATCATCAAAGATCCAATGGATCTGAAGACAATGTCGAAGAGGGTGGAGTCAGAGCAATATTATGTTACATTTGAGATGTTCGTTGCAGATGTCAGAAGAATGTTCGCCAATGCACGAACCTATAACTCTCCAGATACTATTTATTACAAATGCGCTACCAGGCACGATGCTCCAGCTGGAAACCCATTTTCAGAGCAAGGTTCAATCAGGTCTACAGTCTGGCACCAAAATTCAGTAGGAACGCCTGAATGCAATTTACGGATTCCGGGATCCTTTCAGTAA 1638 0.467 MDTHSSHAAGTIRSRSSQSPSPSHSASASATSTIHKRKMASDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSEDESEDAIVDEEEEDYDNDPSMRTFTAARLETPPSAPRNTKLQKDNTTVKIENSDGAKDAATAGTATVGTIPTSTLVPGIMVKEDATKIFTDNLQTGGAYCAREESLKREEEAGKLKFVCLSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNQVFGEIAFCAITADEQVKGYGTRLMNHLKQYARDGDGLTHFLTYADNNAVGYFIKQGFTREIHLEKDRWQGFIKDYDGGILMECKIDPKLPYTDLSTMICRQRQAIDEKIRELSNCHIVYTGYDFQKKEAGIPKKSIKVEDISGLREAGWTPDQWGHSRFRSLTVSTDTATNQKHLTSMHDHADAWPFREPVDARDVPDYYEIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPDTIYYKCATRHDAPAGNPFSEQGSIRSTVWHQNSVGTPECNLRIPGSFQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0470 545 ProSiteProfiles Bromodomain profile. 430 501 IPR001487 GO:0005515
Lele16g0470 545 MobiDBLite consensus disorder prediction 1 35 - -
Lele16g0470 545 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 205 342 IPR016181 -
Lele16g0470 545 ProSitePatterns Bromodomain signature. 435 493 IPR018359 -
Lele16g0470 545 Gene3D - 406 517 IPR036427 GO:0005515
Lele16g0470 545 Pfam Acetyltransferase (GNAT) family 251 308 IPR000182 GO:0016747
Lele16g0470 545 PANTHER GH11602P 22 506 IPR037800 GO:0004402
Lele16g0470 545 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 196 337 IPR000182 GO:0016747
Lele16g0470 545 MobiDBLite consensus disorder prediction 56 71 - -
Lele16g0470 545 Gene3D - 192 343 - -
Lele16g0470 545 PRINTS Bromodomain signature 433 446 IPR001487 GO:0005515
Lele16g0470 545 PRINTS Bromodomain signature 482 501 IPR001487 GO:0005515
Lele16g0470 545 PRINTS Bromodomain signature 447 463 IPR001487 GO:0005515
Lele16g0470 545 SUPERFAMILY Bromodomain 407 506 IPR036427 GO:0005515
Lele16g0470 545 CDD NAT_SF 253 284 - -
Lele16g0470 545 Pfam Bromodomain 427 505 IPR001487 GO:0005515
Lele16g0470 545 MobiDBLite consensus disorder prediction 1 100 - -
Lele16g0470 545 CDD Bromo_gcn5_like 426 506 - -
Lele16g0470 545 SMART bromo_6 411 520 IPR001487 GO:0005515
Lele16g0470 545 MobiDBLite consensus disorder prediction 79 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0470 Lele-ChrLele16 2569124 2575295 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele16g0470 Bromodomain 6e-22 No_clan