Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0465 ATGACGACGGGGATCGGACACGACCAGAACCTCGAGAAGCAGTTTGGAAGGCAAATGGGTTGCATGGCCGGCTTCCTTCACATCTTCGATCGCCACCAGATTCTCTCCGGCAAGCGCATCTACTCTACCAAGCGACTTCCCCCCTCCGATGTGTCGAATTCGTCCCCGGAACCACTTAATTTTGTTGTCTCCCCGGCCAAATGCAGAGAAGTGGAGGCGCAGCCGCCAAGATCAACACCGTCCCCCGACCGGGTGAAACAGAGTCCCTCCAGGGAGCCCCATTCTCCTGCACCCGAATCTCAGGCCAGCACGCCTCTTCATCTTCCCGTTTTTGAATTCAAGGAAGGCACGAGGTCTTCGTGGAAGTTCGCCAGAGAAGTTCCTAGGCTATCTTTGGACAGCAGAGCAGTGGTGGACGCCAAAGGCGCACTACATCCCAGGGAGATCCGAACGAGTTCTGCAATGTTATCGGCCAATCGATGTGAGAATCTAGTTGAAGAAGCAGAAAGTGATAGTGAGAAACAGCGTCGATCGACGAGCGTGATAGCCAGGCTCATGGGGCTGGAATCTTTACCGGATTCGGATCCTGAGCCGGTGAAGAATGCTGAGCTTCGAAGATCCGCTTCTGAGTCCAGAGTTAGCAGAGATCTGTTCCAGCACCGTTACTTTGACAGTAACAATATTCAGCGAAAGCAGTTACAGCAGCAGTCAAACTCTCAGGTTAACATTTCCAGCAATCTAGCTAGGGACCATGCAGCAGCCATCGACAATCGTCGTGTATACAATATCAGGCCGGCAGATCCAAAAGAATTTCCTGTACGAAATGGCAAGACAGAGCCTGCAAAAGCTTCTCCGAGGGGAATAGGACAAAAGAAGAGTTTCTTTGATTCCGCTGACTTTTTCCCCGAGCCAAAGCATACTGTATCAATCTACGGGGAGATTGAAAAGAGGTTGAAGATGAGAGGAATCGATGAGCCATCTAAGGATCTCGAGACTCTCAAGCACATCCTCGAGGCTCTGCAGCTCAAAGGTCTGCTGCATTCCAAGAAATCCTCATCTCAAGCTGACCAGAGGAACTTCGTGTTCAACGGGAGCATCTCAGTGAACGAATCCCCGATTGTTGTGATGAAGCCAGCAAGATCTCCGACTTCATGGAATCGACCTGGAAGGGTCAGTAGTGACTCTCCACCCTCGAACTTTCTATCAAGTCCTCGAGCTCGGGGTAACCTGAACCTTGCCAACGGCACTCTTCCCACGTTGAGCCCCAGGCGTGAAAGGCCTGAGTTGAATCGGAATGCACGAAATCAACCCAGAGTCAGAAACTTGAGCTTGCCCACTCGGAGCGAGAGCAGTGTGAAGAGCCCAAGCCGGAGTAGGCCAATGAACGCGGGGGTACAGAGGAAAGGGAATGACTCTGTTGGTCAGAGAAGAATCTCTCCAGTTCATTCCCCAAAATTAGGTTCCAGAAGGAATGTACCCCATCAGCAAGTGACGAATAGGTCGCCGAGAATGAGAAAACCGGTGGCTGAGACTTACGAGAAGGAGAAGGAGTTGAGTGTAGCAGAGGATGAATCATCCACCATGTCGGAGAGCAGCATTAGCACGTCTTCGCAGACAGATACAGAGAGATGCAAGTTGGAGGAGTACAAGGAAGGGAGAAATCTATTGGAGAGGTGTGACAAGCTGCTGCACAGCATAGCCGAAATAACTGCGAGCGAGTTGCAGCCGAGTCCAGTCTCAGTGCTGGACTCGTCTTTTGACAAGGACGAGTGTTCATCACCATCTCCAGTCATGAAGCGGTGCATTGATTACAGAGAACAACCGGCGGAATCAGGGGACGACATGTGGAGTGCAGCCATGGGTTCCATGGGAGGAGCCAAATCGGAGGAGACATCAGAGGATTTCGACTTCGTTTATGTCTCGGAAATCCTGCGAGCTTCCAATTACTTGCCCAAAGACAGCGACATTTTCCTATTACTGGAGAAGCAGCAATATCTCAAGGGGAAGGACACCTCCAAAGCTTCGACGCTGCAAAGAAGACTCATCTTCGACACCATACACGAAATCCTGAAGCGGAACAAACAACTACCGCCGTGGAAGGCCATTTCGTGGATTGGACAGACGCCGTTGTTGCAGAGAATATGGTCGGAGTTCCGGCGGATCCGAAGAGAGAAGGAGGAATCAGAGGACTTGTTCGAGGTAATATGCGGCTTGTTGAGGAAGGACCTGGCGGAGGACGGCATGAATGGATGGGGAGAATGCCCGGTGGAGATGGGCGAGGTTGTTCTGGACATAGAACGTCTCGTGTTCAAGGACCTCATCGGCGAAACCATACGGGATCTCGCCCAGTCATGTAACAGGCTCTCCGCTCTCCGTAGGAAATTGGTGTTCTGA 2394 0.5163 MTTGIGHDQNLEKQFGRQMGCMAGFLHIFDRHQILSGKRIYSTKRLPPSDVSNSSPEPLNFVVSPAKCREVEAQPPRSTPSPDRVKQSPSREPHSPAPESQASTPLHLPVFEFKEGTRSSWKFAREVPRLSLDSRAVVDAKGALHPREIRTSSAMLSANRCENLVEEAESDSEKQRRSTSVIARLMGLESLPDSDPEPVKNAELRRSASESRVSRDLFQHRYFDSNNIQRKQLQQQSNSQVNISSNLARDHAAAIDNRRVYNIRPADPKEFPVRNGKTEPAKASPRGIGQKKSFFDSADFFPEPKHTVSIYGEIEKRLKMRGIDEPSKDLETLKHILEALQLKGLLHSKKSSSQADQRNFVFNGSISVNESPIVVMKPARSPTSWNRPGRVSSDSPPSNFLSSPRARGNLNLANGTLPTLSPRRERPELNRNARNQPRVRNLSLPTRSESSVKSPSRSRPMNAGVQRKGNDSVGQRRISPVHSPKLGSRRNVPHQQVTNRSPRMRKPVAETYEKEKELSVAEDESSTMSESSISTSSQTDTERCKLEEYKEGRNLLERCDKLLHSIAEITASELQPSPVSVLDSSFDKDECSSPSPVMKRCIDYREQPAESGDDMWSAAMGSMGGAKSEETSEDFDFVYVSEILRASNYLPKDSDIFLLLEKQQYLKGKDTSKASTLQRRLIFDTIHEILKRNKQLPPWKAISWIGQTPLLQRIWSEFRRIRREKEESEDLFEVICGLLRKDLAEDGMNGWGECPVEMGEVVLDIERLVFKDLIGETIRDLAQSCNRLSALRRKLVF 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0465 797 MobiDBLite consensus disorder prediction 70 107 - -
Lele16g0465 797 MobiDBLite consensus disorder prediction 385 418 - -
Lele16g0465 797 PANTHER LONGIFOLIA PROTEIN 3 797 IPR033334 GO:0051513
Lele16g0465 797 MobiDBLite consensus disorder prediction 379 543 - -
Lele16g0465 797 Coils Coil 158 178 - -
Lele16g0465 797 MobiDBLite consensus disorder prediction 187 210 - -
Lele16g0465 797 MobiDBLite consensus disorder prediction 196 210 - -
Lele16g0465 797 MobiDBLite consensus disorder prediction 434 477 - -
Lele16g0465 797 MobiDBLite consensus disorder prediction 506 523 - -
Lele16g0465 797 MobiDBLite consensus disorder prediction 524 540 - -
Lele16g0465 797 Pfam DUF761-associated sequence motif 171 194 IPR032795 -
Lele16g0465 797 MobiDBLite consensus disorder prediction 267 289 - -
Lele16g0465 797 Pfam Domain of unknown function (DUF4378) 636 776 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0465 Lele-ChrLele16 2535345 2538487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0465 482 797 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 46.037 1.47e-69 236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1968 13 27156061 27159596 Lele16g0465 16 2535345 2538487 hybridization
Lele14g1895 14 25464774 25467946 Lele16g0465 16 2535345 2538487 hybridization