Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0464 ATGGCTTCTGAAACGGCGTCGTCGACCGCCGATGGAGAAGCCGTTGCTTCAGTAGCCACTCCGGCAGCAGTAGCAGGGCCTGATAAAAGAGGCAAGCATCGGATTCTTGCGGAAGTGAAGCGTCTTGAGCAAGATACCCAATATCTCGAGGAAGAACTGGAAGTGCTTGAAAAAACCGACAACGTGTCAACCATATGCAAGGAGTTACTGCAGAACATGGAAAGTAGGTCTGATCCACTACTCCCAGAAATCCGTGGGCCTGTGAACCTGTTGTGGGATAGATGGTTTGAAGGGCCTCAGGATGCCCAATCATGTAGATGTTGGATACTTTGA 333 0.5015 MASETASSTADGEAVASVATPAAVAGPDKRGKHRILAEVKRLEQDTQYLEEELEVLEKTDNVSTICKELLQNMESRSDPLLPEIRGPVNLLWDRWFEGPQDAQSCRCWIL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0464 110 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1 18 110 IPR045878 -
Lele16g0464 110 Pfam GGL domain 37 110 IPR015898 GO:0007186
Lele16g0464 110 MobiDBLite consensus disorder prediction 1 30 - -
Lele16g0464 110 Coils Coil 32 59 - -
Lele16g0464 110 SMART G_gamma_2 36 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0464 Lele-ChrLele16 2526832 2529326 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0464 16 2526832 2529326 Lele05g1425 05 9057310 9058148 CCT
Lele16g0464 16 2526832 2529326 Lele06g1288 06 8208079 8208925 CCT
Lele16g0464 16 2526832 2529326 Lele07g1489 07 9090477 9091313 CCT
Lele16g0464 16 2526832 2529326 Lele08g1284 08 8166182 8167025 CCT
Lele13g1969 13 27165077 27167494 Lele16g0464 16 2526832 2529326 hybridization