Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0459 ATGTTTCACGATCACGGACTCTGGCACCTACTCGCTTTAGGGTTTCTGATTTCCTTCATAATTCCCGTCGCTTACGGCGAATCGTCTACCTGTTTGACTGTCTACAAGAAAGGTGGTGCTCCGGCGGTTTTCCAATCCCCGAAATGCCCCCGCTGGAATCTCTTCGATGATGGTTCCAGTTCCCAAACCCCGGCGCGTTGTCAGTACGCGATGCTTCAGGGCAGAAGAAAATCTCAGGAGGACCGCACTCTCTGCGTCCTTGATGTTCGCATTCCCTTCCCTGGTAAAATGGGAATTAAGGAGGTTGTGGTTGGAATCGTAGCAGTTTTTGATGGTCATAATGGTGCAGAAGCTAGTGAGATGGCATCCAAACTTTTGGTGGAGTATTTTGTGTTGCATACCTATTTTCTTTTGGATGCAACATATTCATTTCTGTTGAAGACATCGTCAGGAAGACTGCCTCATAAGAGAGATTGTGATGAAGAAAGACATCTACACAAGTGGGAAGAGATTCTTGGTTGGGATGAATTGCATTTTGGAAGGTTTGAGAATAAATTTTCAGCAAATTTTGACGAATCTTTTCACTTGGAAATTTTGAAGGAAGCGTTGTTGAGAGCAATCCATGATATTGATGTAAAATTTTCTGAGGAAGCATCTAGGAGTAATCTTGATTCCGGTTCTACAGCAACCACTATATTAATTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCTTCTTGTGTTCTGAGAAGTTTCAGACTCCCAAAGAGGCTAAAGCATCACTGTTAAAGTTATACAGGCAGAAGGAGGGTGAAAGTTTTGTTTCCCGTGTCTGGGATCGTGAAAAGTACAAATTAGCTTCCTTGTTCGGATTCACTCACTTTGCAGCTAAGGAATTAACCAGTGACCATCATCCAGACAGAGAAGATGAAAGAACTCGGGTGGAAACAGCTGGTGGTCAAGTTATTGATTGGGGAGGTGTGCCTCGCATAAATGGTCAGCTAGCTATTACACGGGCTATTGGTGACGTGCCCTTCAAAAGTTATGGTGTTATATCCGTACCAGAGGTGACAGATTGGCAGCCTCTGACTGCCAATGATAGCTATTTGGTGGCTGCATCTGATGGTGTTTTTGAGAAGATGGGCTCCCAGGATGTATGTGATATGTTGTGGGAAGTACATAGTTACGGTAACCCAAGATCTGAGGTTTCCCTTTCATGCTCCTATTCACTGGCGGATTGTATTGTCAACGCTGCCTTGAAAAAGGGAAGTATGGATAATGTGGCAGCAGTTGTGGTTCCTCTGGAATCTGCTATTGTTTCTGATGACTCATTTGGGAGAAGTTGTATTGAGAAGAGGGATGTGGATACCCCGCTACTTGGACTGCAGGAATTTGCTTCCAGAAGCTCTGCTAATGGCATTACATCGGATCTAATGCAACTGGAGCATCTGCGTCCAGTGGATGCTGGGTTTGAGCGTATATTGGCTGAAGTGAAATATGGTGATGTTGGATGTTTTTATTTATCTGAAAATCTTGATGAAGCTATGGACTATAAGCAGCCTGCTACAAAGACCAACTGGTTAAACTATTTAGATAAACTACCAGAGCCTTTGCCAGATGCTCTTCATCAACATTCTGGTGGTCCTGTAAATTTGTACAACAATCAAAATTTTTGCTTTCAACTTGGCATGACTGTCAATGGAGCTAACGAGCAATGCATAAATCCTGAATCCTTTGCTAGTTTTATTGGTCTGCTTGAATCAATTCCTTTACATGATACTAGTTCAAATAATGGGTCTTTTGATTCTTCGATGAGGTATGTTTTAAAACAGAGGTTTGGCCGTGGATCATATGGTGAAGTGTGGTTGGCCTTTCATTGGAACTGTCAAGTTGGCAATGACAAGGATAACAATAATTACTCCCTTAGCTTTATCAATTTTGAGTCATACAATAGAAATAGCAGCTCAAGTACTCATGATTGCCCAAACGGTCCTTCTAACCACAACATGTACATTCTGAAACGGATAATGGTAGAGAGAGGGGCTGCTGTTTATTTAAGTGGTCTGAGGGAGAAGTATTTTGGAGAAGTTTTTTTAAATGCTTCCACGTGCTTTGAAGATCTATTTTCAGCTGGAAACTCAAACTGTGTCTCAAGAAAATCACAATTCAGGTCTTATGACCAATTAAAAACCAATGATTCCATGCTACATTATATAAGAAACTCTTGGGGTTCTGAGTATTTATTTACAGACAAATTCCAGTTGCAAAAGGCCATCCATGAAGAGGGTCTGAAACATATCGCAAGATACGTGGAATCTTTTGAATCTCGATCTAACGAATTCTGGCTTGTATTCCATTATGAAGGCATATCTTTGTCCAAACTTATGTATACTGTGGAGGAAGCTTATGATACTGCTGATGGTAAAAGATCTGAACATGTGAAACATGTTCAGATATTACGTCCATCAAAGTGGTGGCATTGGTTGAAGACAACAGAAGAAGGGCAACAGGAAATGCGCAACATTTTATGGCAGCTGTTAATGGCACTGAAGTCCTGCCATGATCGGAATATCACTCACAGAGATATCAAACCTGAGAATATGGTGATATGCTTTGAAGAACAGGAGACCGGAAGATGCTTAAAAGAGGTTCCAACAATTAATAGGACGATCTCGACCAAAATGCGTATCATTGACTTTGGCAGTGGAATTGATGAATTTACATTGAAGCACTTATATGGATCTGCTGGGCCATCTCGAGCTGAACAAACTTACGAGTATATGCCTCCTGAAGCTTTGCTAAATGCTACTTGGTATCAAGGACCAACAAGCTCAACTTTGAAATATGACATGTGGAGTGTTGGTGTTGTGATGTTGGAGTTGATATTGGGAACGCCAAATGTTTTCCAGATAAGCTCTTTAACACGGACTCTTTTGGACCGGCATCTTGAGGGCTGGAATGATGGCATAAAGGAGCTGGCGTACAAACTAAGATCGTTCATGGAATTGTGCATATTAGTCCCTGGGATTTCTGGCAGTTCCTTCAAACAGTATCACACAGGGAACCAAGTTGGAGTCCCTCCCGCATCATGGAAATGCTCCGAGGATTTCTTTTCGCATCAAATTAAGAGTCGGGATCCTCTTAAATTAGGGTTTTCAAACATCTGGGCTCTACGGTTAGTGCGTCATCTATTGCTCTGGGACCCAGAAGATCGACCGAGTGTTGACGAGGCATTGCAGCACCCCTATTTTCAACCTTCCCCAAGTGGCTGA 3285 0.4219 MFHDHGLWHLLALGFLISFIIPVAYGESSTCLTVYKKGGAPAVFQSPKCPRWNLFDDGSSSQTPARCQYAMLQGRRKSQEDRTLCVLDVRIPFPGKMGIKEVVVGIVAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDATYSFLLKTSSGRLPHKRDCDEERHLHKWEEILGWDELHFGRFENKFSANFDESFHLEILKEALLRAIHDIDVKFSEEASRSNLDSGSTATTILIADDKILVANIGDSKAFLCSEKFQTPKEAKASLLKLYRQKEGESFVSRVWDREKYKLASLFGFTHFAAKELTSDHHPDREDERTRVETAGGQVIDWGGVPRINGQLAITRAIGDVPFKSYGVISVPEVTDWQPLTANDSYLVAASDGVFEKMGSQDVCDMLWEVHSYGNPRSEVSLSCSYSLADCIVNAALKKGSMDNVAAVVVPLESAIVSDDSFGRSCIEKRDVDTPLLGLQEFASRSSANGITSDLMQLEHLRPVDAGFERILAEVKYGDVGCFYLSENLDEAMDYKQPATKTNWLNYLDKLPEPLPDALHQHSGGPVNLYNNQNFCFQLGMTVNGANEQCINPESFASFIGLLESIPLHDTSSNNGSFDSSMRYVLKQRFGRGSYGEVWLAFHWNCQVGNDKDNNNYSLSFINFESYNRNSSSSTHDCPNGPSNHNMYILKRIMVERGAAVYLSGLREKYFGEVFLNASTCFEDLFSAGNSNCVSRKSQFRSYDQLKTNDSMLHYIRNSWGSEYLFTDKFQLQKAIHEEGLKHIARYVESFESRSNEFWLVFHYEGISLSKLMYTVEEAYDTADGKRSEHVKHVQILRPSKWWHWLKTTEEGQQEMRNILWQLLMALKSCHDRNITHRDIKPENMVICFEEQETGRCLKEVPTINRTISTKMRIIDFGSGIDEFTLKHLYGSAGPSRAEQTYEYMPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELILGTPNVFQISSLTRTLLDRHLEGWNDGIKELAYKLRSFMELCILVPGISGSSFKQYHTGNQVGVPPASWKCSEDFFSHQIKSRDPLKLGFSNIWALRLVRHLLLWDPEDRPSVDEALQHPYFQPSPSG 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0459 1094 PANTHER PROTEIN PHOSPHATASE 61 438 - -
Lele16g0459 1094 Pfam Protein kinase domain 837 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0459 1094 Gene3D Transferase(Phosphotransferase) domain 1 828 1089 - -
Lele16g0459 1094 Gene3D - 61 443 IPR036457 -
Lele16g0459 1094 Pfam Protein phosphatase 2C 197 432 IPR001932 -
Lele16g0459 1094 ProSiteProfiles Protein kinase domain profile. 611 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0459 1094 SUPERFAMILY Protein kinase-like (PK-like) 610 1090 IPR011009 -
Lele16g0459 1094 SUPERFAMILY PP2C-like 64 440 IPR036457 -
Lele16g0459 1094 SMART PP2C_4 58 437 IPR001932 -
Lele16g0459 1094 FunFam uncharacterized protein LOC106771884 isoform X8 828 1089 - -
Lele16g0459 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Lele16g0459 1094 ProSiteProfiles PPM-type phosphatase domain profile. 66 439 IPR001932 -
Lele16g0459 1094 SMART serkin_6 611 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0459 1094 CDD PP2Cc 73 439 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0459 Lele-ChrLele16 2451272 2461456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0459 682 1093 PP2C-type Phosphatase Gene Family AT3G63340 61.687 2.05e-173 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Lele16g0459 Pkinase 2.1e-25 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1902 14 25539108 25549297 Lele16g0459 16 2451272 2461456 hybridization