Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0453 ATGAATGTGGAGGGTGGACACGGCGGCGTGGCCATACCACCGGCTAAGCCATTTTTGAAGTGGCTCAAGTACTCTCTCAAGGAGACTTTCTTCCCCGATGACCCCTTGAGGCAGTTCCAGAACCAGCCTCCTTCCAAGAGGTTCCTGCTTGCCCTTCAATACATCTTCCCCATCTTCCAATGGGCTCCTCGCTACTCTCTCCACTTCCTCAAATCCGACCTCATTGCCGGCATCACCATCGCCAGCTTGGCTATTCCTCAGGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTCCCATTCTCGGCCTCTATTCGAGCTTCATACCGCCATTGATTTATGCGATGCTGGGAAGCTCCAGGGATTTGGCAGTGGGAACCGTGGCTGTTGGATCGCTTCTGATGGCTTCCATGTTGGGGACTGTCGTTAATCACAACGACAACCCAAAACTTTATCTTCACCTTGCCTTCACTGCTACTTTCTTCGCCGGCATTTTTCAGGCCGCTCTGGGTCTGTTCAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAACTATAATAGGGTTCATGGGAGGAGCAGCGACTGTGGTATGCCTGCAACAGCTGAAATCCATTCTGGGGCTTCAGCATTTTACGCACGAAGCCGATCTCGTCTCCGTGATGCGATCGGTTTTTAGCCAGACGCAAGAGTGGAGGTGGGAAAGCGCCGCGTTAGGAAGCTGTTTCATTTTCTTCCTCCTCATCACCAGATTCTTCAGCAAAAAACAACCAAAATTCTTTTGGGTGTCAGCAATGGCGCCGTTGATGTCCGTTATCTTAGGAAGCATTCTGGTTTACGTCACTCATGCGGAGAAACACGGCGTTCAAGTGATAGGAGACTTGAAGAAGGGGCTAAATCCAAGTTCCCTCACAAATCTGGTATTCGTGGCGCCTTATATGAGCACTGCCTTTAAGACTGGCCTTATCACTGGCATCATAGCTCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTACAAGAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATTGTTGGTTCCTTCGCCTCTTGCTACCTCACCACGGGGCCATTTTCACGTTCAGCTGTGAACTACAATGCTGGATGCAGGACTGCAGCATCAAATATAGTAATGGCAATAGTAGTTATGTTGACCTTGTTATTCCTGACACCCTTGTTCCATTACACTCCCCTGGTCGTTCTATCAGCTATAATCGTGTCAGCAATGCTTGGTCTTATAGATTACCAAGCAGCCATCCATCTCTATAAGATTGACAAATGTGATTTTCTAGTGTGCATCAGTGCCTACATTGGCGTCGTCTTTTGCAGCGTTGAAATTGGCCTCGTTATAGCGGTTGCAATATCTGTAATCAGGGTACTTCTCTTTGTTGCAAGGCCAAGGACATCTGTTTTAGGCAACATTCCAAACTCTGCAGTATATAGAAATGTTGAACAATATCCAAATGCAATCCACGTTCCTGGGATTCTAATTCTTGAGATTGATGCACCCATATACTTTGCTAATGCAAGCTATTTGAGAGAGAGGATCATGAGGTGGATTGATGAAGAGGAAGACAGGATTAAAGGTACAGAGGAGACAAGCTTGCGTTATGTTATAATGGATATGACTGCCGTTGGGAACATCGACACTAGTGGAATAAGCATGCTTGAGGAGATCAAGAAGATGGTAGATAGAAGAGAACTACAACTTGTTCTGGTGAATCCCGGAGGCGAGGTGATGAAGAAACTTAACAAAGCCAAGTTGATAGAGGAAATAGGGCAGAAATGGATACATCTAACAGTAGAAGAGGCAGTGGAAGCATGCAACTACATGATTCGCACATGCAAAACCAACTCCACGAAGAATGAATCAGAGGGTTGGAACAATGTGTGA 1941 0.4668 MNVEGGHGGVAIPPAKPFLKWLKYSLKETFFPDDPLRQFQNQPPSKRFLLALQYIFPIFQWAPRYSLHFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMLGSSRDLAVGTVAVGSLLMASMLGTVVNHNDNPKLYLHLAFTATFFAGIFQAALGLFRLGFIVDFLSHATIIGFMGGAATVVCLQQLKSILGLQHFTHEADLVSVMRSVFSQTQEWRWESAALGSCFIFFLLITRFFSKKQPKFFWVSAMAPLMSVILGSILVYVTHAEKHGVQVIGDLKKGLNPSSLTNLVFVAPYMSTAFKTGLITGIIALAEGIAVGRSFAMYKNYHIDGNKEMIAIGTMNIVGSFASCYLTTGPFSRSAVNYNAGCRTAASNIVMAIVVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLYKIDKCDFLVCISAYIGVVFCSVEIGLVIAVAISVIRVLLFVARPRTSVLGNIPNSAVYRNVEQYPNAIHVPGILILEIDAPIYFANASYLRERIMRWIDEEEDRIKGTEETSLRYVIMDMTAVGNIDTSGISMLEEIKKMVDRRELQLVLVNPGGEVMKKLNKAKLIEEIGQKWIHLTVEEAVEACNYMIRTCKTNSTKNESEGWNNV 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0453 646 TIGRFAM sulP: sulfate permease 57 620 IPR001902 GO:0016020|GO:0055085
Lele16g0453 646 PANTHER SULFATE TRANSPORTER 22 625 IPR001902 GO:0016020|GO:0055085
Lele16g0453 646 Pfam Sulfate permease family 70 450 IPR011547 GO:0016020
Lele16g0453 646 ProSiteProfiles STAS domain profile. 501 624 IPR002645 -
Lele16g0453 646 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271|GO:0008272
Lele16g0453 646 Gene3D STAS domain 481 627 IPR036513 -
Lele16g0453 646 SUPERFAMILY SpoIIaa-like 503 625 IPR036513 -
Lele16g0453 646 Pfam STAS domain 502 620 IPR002645 -
Lele16g0453 646 CDD STAS_SulP_like_sulfate_transporter 502 617 - -
Lele16g0453 646 FunFam Sulfate transporter 31 481 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0453 Lele-ChrLele16 2429687 2434924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0453 10 646 Inorganic Solute Cotransporters AT4G02700 66.928 0.0 877
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0453 16 2429687 2434924 Lele16g0453 16 2429687 2434924 ECH
Lele14g1907 14 25565805 25570200 Lele16g0453 16 2429687 2434924 hybridization