Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0441 ATGAGGGAGGGGCTTAGATCTCGGAAGCGATTGGAGAAGCCGGAGAGAGACGACGTTTCTGGAAGTGGAGTATTTCAAAAGAAAGGAAGCATCATAAAGCAGGATGCTCCTGATTCTAGGGGCGTGGATTCTTCGCATGAGAGAGAGCCTTTGGACTTGGAAGTTGCGAATAAAGAAGTGGAGAAAGCAGTAAAAGAATGTGAACTGGACTGTGATATGGGGACTGGAACGAATGCTGTGTTAGTTGAGAAGGAGAACAATAGAAGGGTTTTAAATTGCGGGGGTAACATTGAGAGGAAGGCGAAGAAGGAAGGGGACTCGAATGATAAAGTGCAAATTGTTGGTCAAGTGTTGCGCTCACATTTGAAGAGGGCCAATGAGTCTGATGGGTATAAGAAGATACAGGTTAAGGCAGAAGAGGTAGAGGCCCATGAATGCGTTAGTAGTGGTTATGAGGAGAAGAAGATTAAGGAAGGCAATGGCAGACGGAAGTTGAAACAAAAGCGTGGGAGGCCCCCCAAAACAGAGATGACAATGCAGGTTGGTCAGTTGCCACGGAAACTAGGGAGGCCACCCAAGGCCAGGCAAAATCATAAGCTTATCGGAGTGGGATGTAGTAAAAATAGAAAGCTGGGCTTTCATAAAGATAAAAAAGGTTTAACTATTAGAGAGGGTGCCTGTAGAAGTCCAACCAAACTATGCTCAAAGAAGAGATCCTTTGGGAAGAAATTAGAAGAGGATTTTTCTCCTATTAAATCTGAGAACAATGTGGGCGCATCACCATTGAGATCAAATTCTTTAAATGCTCATGTTGCTAAGAAAAGGCAAGCAAAGCAGTTGGTGAGGGACCAGATAATGGAACTGCTCATGGCTGCAGGCTGGACAGTTGACTATAGACCTAGGAATGCCAGAGATTATAATGATGCAGTGTATGTTAGTCTAGATGGAAAGACCCACTGGTCAATTACCTTGGCCTACAATAGGCTGAAAAAGCACTATGAAGATGGTGACGGTGAAGGTAAGGCGTATGGACCAGATTTTAAATTCCCACCTATACGTGAAGAAGAATTTAAAACTTTAACTAAGGTTATTAGCAAGCGAAGAAAAGGCAAAAAGAAAGGGGCAAAGGATGGAGGTAAAGTTAATGGAGCCAATAAAAAAGCAAAAACAGAAAGACAAGGGTCCATTTCAAGGCTGGGTAAGTCAATGAAGGGGAAGAAGAGGAAACGGGCATTTATTGAGGAGGATTATTCTGATGTAGCATTGCCTAGCAGAATGTCGATTCTGATTAAGGATCATAAGCGACAGAAATCACGAAACAAGAAGCGATGTGATCTGTTGGTTCTCAATGTTGAGAAAGAGATAGATTCGGAAGTTGATGGATATGTTCTGTTGGTTCTCAATGTTGAGAAAGAGATAGATTCGGAAGTTGATGGATATGTTCCTTACAATGGAAAACGTACTCTACTTGCCTGGATGATTGATATGGGAATGGTCTTGCAAAATGGTAAGGTTCATTACACAAATCATGGAAGTAAAGATGTGGCATTGGAGGGTAGGAGGGAGGAACTTCTCTCGCAATGCCTGCTAGACTTGTGGAATAACCAAGATGAATCTAAACGTAAAGGTTTTCATTTCGTTGATGTTGCTGGTGAAGACCCTAATGATGACACTTGTGGTGTCTGTGGAGATGGCGGGGACCTGATCTGTTGTGATAGTTGCCCATCAACATTCCATCAAAGCTGCTTGGGTATAAAAATCACAGATCCTGTATTGAGGTGGATTGTGCCCAGATTGATGATTCCTGTGCATTTTGTGGATACAGATGTCAAGTGGTGTGATCTTGCTTATAAATTTTGTCAAGAGTTTTGTCAACTGTCTGATTGCAATACTGACCTCAAACTAGCACTTGAACAGTTTTGTGCTATATCTTTTGGCTCAAGCTCAAACTTCAACCGCCTGAACTATAGGAGATTTTTTACTGCCATTCTAGAGAGGGGAGATGAAATTATCTGTGCTGCATCTATTAGGATCCATGGGAACCAACTAGCAGAGATGCCATTTATTGGGACCCACTCTATTTATAGGCAGCAAGGAATGTGCCGTCGTCTTCTCAGTTCCATTGAAGATGCACTCAGCTCTCTGAATGTAGGGTTATTGGTAATACCAGCTGTAGCAGAAGTCAGAGAAAATTGGACTTCAGTTTTTGAGTTTGAGCCACTTGATCCGACAAGCAATCAAATAGTAAAGAACTTGAATCTGTTGGTGTTCCCTCATGTAGATATGTTACAGAAAAAGATAACCAAGCCTAATTTTGCTGAAAAAAATCTGCTTCCTGCAGAAGTTTCCAATCCTGAACTTCCCAAGAATATATGTCATGAGTTGGACTCTTCTGGAACTGAAGCAATCGTTTCTGCTGGGGTTTCTCCTTCAGATGCATGCCAGATAAATGATAAATACATATCTATTGAATCTGGCCCTCAGCGTCCTGAGGGCTCATTCAATGACTCTCCTGTTTTTGATAGTGAGACTGTAAATGATGAATGTTCTGAAGATGTAAAATGTCAAGTAATCTGTCAGGCAATATCTGAGATTGTGTCTTGTATGCGGGAATCCAAAGATTCTGATGAAATCGCATATGATAATTTGAAAATTGGAACCCCGTTGAAAGATAATGGTGGAACTTTGCATCCCGAGTCTCAGGAATTACAGTTGGCCGGATCTGTTTTTTGTTCACATAAAAATTCCGAAAGTTGTGGACCAATAAGCAACCATGACTCCGTTCAGTATCATTCGGTAGAATCTAAAGAATTGCTTTCTAAAGAATTACCCTTTAATTGCATTAAACAGTCCAGTGCGGTTGGTGAGCTAAACGCTGAAGAAGTTGGTGCAGCCAAGACATCCAATCTCCTGACTGACACAAATTCCGGAGATTGCCAACCCATAAAAGTGGCGTCAGCTGATAGGAAGTTAGTTCTCATTAATAACCCTTGGACAGACCACTCTTCAGAGGTGCGAGATCCTGGTTTACGGGTTGATAGAGCTACGCAGTGTAATGGTTCATCCCTTGTAGCCCAAAAACTGCTGGCGTGGCTCTTCACTGCGCATCTGCTGGTGGTTCTGAGGGGATAG 3132 0.4231 MREGLRSRKRLEKPERDDVSGSGVFQKKGSIIKQDAPDSRGVDSSHEREPLDLEVANKEVEKAVKECELDCDMGTGTNAVLVEKENNRRVLNCGGNIERKAKKEGDSNDKVQIVGQVLRSHLKRANESDGYKKIQVKAEEVEAHECVSSGYEEKKIKEGNGRRKLKQKRGRPPKTEMTMQVGQLPRKLGRPPKARQNHKLIGVGCSKNRKLGFHKDKKGLTIREGACRSPTKLCSKKRSFGKKLEEDFSPIKSENNVGASPLRSNSLNAHVAKKRQAKQLVRDQIMELLMAAGWTVDYRPRNARDYNDAVYVSLDGKTHWSITLAYNRLKKHYEDGDGEGKAYGPDFKFPPIREEEFKTLTKVISKRRKGKKKGAKDGGKVNGANKKAKTERQGSISRLGKSMKGKKRKRAFIEEDYSDVALPSRMSILIKDHKRQKSRNKKRCDLLVLNVEKEIDSEVDGYVLLVLNVEKEIDSEVDGYVPYNGKRTLLAWMIDMGMVLQNGKVHYTNHGSKDVALEGRREELLSQCLLDLWNNQDESKRKGFHFVDVAGEDPNDDTCGVCGDGGDLICCDSCPSTFHQSCLGIKITDPVLRWIVPRLMIPVHFVDTDVKWCDLAYKFCQEFCQLSDCNTDLKLALEQFCAISFGSSSNFNRLNYRRFFTAILERGDEIICAASIRIHGNQLAEMPFIGTHSIYRQQGMCRRLLSSIEDALSSLNVGLLVIPAVAEVRENWTSVFEFEPLDPTSNQIVKNLNLLVFPHVDMLQKKITKPNFAEKNLLPAEVSNPELPKNICHELDSSGTEAIVSAGVSPSDACQINDKYISIESGPQRPEGSFNDSPVFDSETVNDECSEDVKCQVICQAISEIVSCMRESKDSDEIAYDNLKIGTPLKDNGGTLHPESQELQLAGSVFCSHKNSESCGPISNHDSVQYHSVESKELLSKELPFNCIKQSSAVGELNAEEVGAAKTSNLLTDTNSGDCQPIKVASADRKLVLINNPWTDHSSEVRDPGLRVDRATQCNGSSLVAQKLLAWLFTAHLLVVLRG 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0441 1043 PANTHER PHD FINGER PROTEIN 12 270 633 IPR042163 GO:0003714|GO:0045892
Lele16g0441 1043 MobiDBLite consensus disorder prediction 364 401 - -
Lele16g0441 1043 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 654 723 IPR016181 -
Lele16g0441 1043 SUPERFAMILY FYVE/PHD zinc finger 551 589 IPR011011 -
Lele16g0441 1043 MobiDBLite consensus disorder prediction 157 195 - -
Lele16g0441 1043 MobiDBLite consensus disorder prediction 39 54 - -
Lele16g0441 1043 MobiDBLite consensus disorder prediction 376 394 - -
Lele16g0441 1043 MobiDBLite consensus disorder prediction 1 54 - -
Lele16g0441 1043 MobiDBLite consensus disorder prediction 1 22 - -
Lele16g0441 1043 SMART PHD_3 558 600 IPR001965 -
Lele16g0441 1043 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 550 598 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0441 Lele-ChrLele16 2378314 2384282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0441 164 893 PHD Transcription Factor Family AT5G36670 29.380 1.73e-91 316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1473 05 9435277 9444263 Lele16g0441 16 2378314 2384282 CCT
Lele16g0441 16 2378314 2384282 Lele16g0441 16 2378314 2384282 ECH
Lele13g1987 13 27277858 27284777 Lele16g0441 16 2378314 2384282 hybridization
Lele14g1921 14 25614602 25617272 Lele16g0441 16 2378314 2384282 hybridization