Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0430 ATGCGTATCTTCGTGATCCCTTGTCATCACTACATGTCAATTCCTGGCCTACAGAGTGCTCGCATTCAGACCGTGGTGTGCATACCTCTGTTGGACGGCGTCGTAGAGTTCGGCACGACAGATAAGGTTCAGGAAGACCTTAATTTTATCCAGCATGTGAAGAGCTTCTTCATAGATCACCAGAGGCAGCACCACCCTCCTCCGCCAAAGCCCGCCCTCTCTGAGCACTCTACCTCCAACCCCACCACCTCTTCCGACCACTCCCGCTTCCACTCCACTCCCATCCCCGTTGCCATGTACTCCGCCGTGGACCCATCGCCCGCCACCCCAGACGCTCCCAACAACCACATGAACGAAGATGACGACGAGGACGATGAAGAAGAGGCTGAGTCCGACTCCGAGGCAGAAACGGCCCGTAACAGCCGCCCAACTTCTACGCCGGAGGCGTCAGGCGTGGCAGTTCCCACTGCAGCAGAACCAAGCGAGTTAATGCAGTTGGAGATGTCGGAGGATATCCGGGTAGGATCACCGGACGATGGCTCCAACAATCTCGACTCAGATTTCCATATGCTGGCGGTGAGCCACCCAACGGATCACGAGCGACGAGCGGACTCGTACAGGGCCGAGTCTACCCGGAGGTGGGTCGAACCAGTGCTTCAACTACCAGCTTCAGAAGGCGCTCAGCTAGAAGACCTCACACAAGAGGACACCCACTACTCTCAAACTGTGTCCACCATCCTCCATAATCAGTCCATCCGGTGGGCCGAATCACCCTCCGTCGACTACATAACTTACTCCTCTCATTCCGCTTTTGCCAAGTGGAACACCCGTGCCGACCTCCTCCACACCTCCGCCGACGGCACCTCCCAGTGGCTCCTCAAGTACATTTTGTTCACCGTTCCTTTCCTTCATGCCAAGTCCCAAGACGATAACTCGCCCGCGCCCCGAGAGGGAACCGACCCCGTCCCGCGCCTCCGTGGAAAGGGAACGCCGCAGGATGAGCTGAGCGCCAACCACGTCCTGGCCGAGCGACGCCGACGCGAGAAGCTCAACGAGAGGTTCATCATACTGAGATCGCTCGTGCCCTTCGTCACCAAAATGGACAAGGCATCCATATTAGGGGACACCATCGAGTACGTGAAACAGTTGCGTAAGAAGATCCAAGATCTGGAGGCACGTAACCGCCAGATGGAGGCAGAGCAACAGTCAATGGAGCAACAGAGGAGCCTGACGAGAGTGGGGTCGGACAAGAGGAAGATGAGGATCTTGGATGGGATCGGAGGGATGAGGAAGCCGAAATCAGTGGAGTCGTCACCGCCGCCATCGCCGTCGGGAGTGGTGATATCGGTGCAAGTGTCGATCATAGAGAGCGACGCGCTGTTGGAATTGGAATGCGAGAACAGGGAGGGGCTGTTGCTGGATGTGATGCAGATGCTGAGAGAGATGAGGATAGAGGTGACGACGGTGCAGTCGTCGCTGAACAACGGGGTGTTCGTGGCGGAGCTGAGGGCGAAGGTGAAGGAAAATCCGAACGGAAAGAAGACGAGCATAGTTGAAGTAAAGAGGGCGCTCAACCAAATCATACCCCATAGTGATTGA 1599 0.5666 MRIFVIPCHHYMSIPGLQSARIQTVVCIPLLDGVVEFGTTDKVQEDLNFIQHVKSFFIDHQRQHHPPPPKPALSEHSTSNPTTSSDHSRFHSTPIPVAMYSAVDPSPATPDAPNNHMNEDDDEDDEEEAESDSEAETARNSRPTSTPEASGVAVPTAAEPSELMQLEMSEDIRVGSPDDGSNNLDSDFHMLAVSHPTDHERRADSYRAESTRRWVEPVLQLPASEGAQLEDLTQEDTHYSQTVSTILHNQSIRWAESPSVDYITYSSHSAFAKWNTRADLLHTSADGTSQWLLKYILFTVPFLHAKSQDDNSPAPREGTDPVPRLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLEARNRQMEAEQQSMEQQRSLTRVGSDKRKMRILDGIGGMRKPKSVESSPPPSPSGVVISVQVSIIESDALLELECENREGLLLDVMQMLREMRIEVTTVQSSLNNGVFVAELRAKVKENPNGKKTSIVEVKRALNQIIPHSD 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0430 532 SMART finulus 340 389 IPR011598 GO:0046983
Lele16g0430 532 PANTHER TRANSCRIPTION FACTOR TT8 17 530 - -
Lele16g0430 532 MobiDBLite consensus disorder prediction 60 155 - -
Lele16g0430 532 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 334 383 IPR011598 GO:0046983
Lele16g0430 532 MobiDBLite consensus disorder prediction 75 91 - -
Lele16g0430 532 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 57 IPR025610 -
Lele16g0430 532 MobiDBLite consensus disorder prediction 307 340 - -
Lele16g0430 532 Gene3D - 334 410 IPR036638 GO:0046983
Lele16g0430 532 Coils Coil 373 407 - -
Lele16g0430 532 Pfam Helix-loop-helix DNA-binding domain 337 384 IPR011598 GO:0046983
Lele16g0430 532 MobiDBLite consensus disorder prediction 117 133 - -
Lele16g0430 532 Gene3D - 458 528 - -
Lele16g0430 532 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 336 409 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0430 Lele-ChrLele16 2306420 2309343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0430 18 78 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 65.574 3.51e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele16g0430 HLH 1.6e-12 No_clan