Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0429 ATGGCTGCGCCTCTTGCTACCAGGCTTCAGACCATGCTGCAAGCCGCCGTGCAATCGGTTCAATGGACTTATAGTCTCTTCTGGCAACCTTGTCCCCAGGAAGGGATTCTGGTGTGGGCGGATGGTTACTACAATGGGGCAATTAAGACTCGGAAAACGGTGCAGCCAATGGAAGTTAGTGCCGAGGAAGCGTCTCTCCAAAGAAGCCAGCAACTTAGAGAGCTCTACGAATCACTGTCTGCCGGAGAGACCAACCCTCCGGCTCGACGGCCTTGTGCGGCCTTGTCGCCCGAGGACTTAACAGAATCCGAATGGTTCTATTTGATGTGTGTCTCTTTCTCCTTTTCTCCTGGCGTCGGGTTGCCGGGGAAAGCGTATGCGAGGAGGCAGCATGTATGGCTTGCCGGTGCAAACGAGGTGGACAGCAAAACGTTTTCAAGAGCTATTCTTGCCAAGGTGCACGACCATTTTAAAACTAATTATTGTAACTAA 492 0.5203 MAAPLATRLQTMLQAAVQSVQWTYSLFWQPCPQEGILVWADGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNPPARRPCAALSPEDLTESEWFYLMCVSFSFSPGVGLPGKAYARRQHVWLAGANEVDSKTFSRAILAKVHDHFKTNYCN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0429 163 PANTHER TRANSCRIPTION FACTOR TT8 7 152 - -
Lele16g0429 163 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 155 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0429 Lele-ChrLele16 2304229 2306286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0429 9 152 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 77.083 3.09e-78 239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2001 13 27363511 27368179 Lele16g0429 16 2304229 2306286 hybridization
Lele14g1933 14 25685016 25690141 Lele16g0429 16 2304229 2306286 hybridization