Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0423 ATGGCTTCCACATTTCAATTCCTCCTCCTTCTCTTGCTTTTCGTTGCTCCTTCTCCTTCTGCTCAATCCTCTTTCAGACCAAAGGCCCTTGTTATTCCCGTTACTAAAGACGCCTCCACTCTCCAGTACGTCACTCAAATTCACCAGAGAACCCCACTTGTCCCCCTCAACCTCGTCCTTAATCTCGGTGGCCAATTCCTCTGGGTTGATTGCGACCAGAACTACACCTCCTCCACCTACCGCCCTGCTCGCTGCAACTCCGCCCAATGCTCCCTCGCTGACGCCTCCGGCTGCGGCGAATGCTTTTCGCCTCCCAGGCCAGGCTGCAACAACAACACCTGCGGCGTGATGCCGGACAACACCGTCACCCGCACTGCCACCAGCGGTGAGGTTGCCCAAGACGTCGTGGCCGTTCAGTCCACCAACGGCTTCAACCCGGGTCGAAAAGTCGCGATTGCTCGCTTCATTTTCTCGTGTGCGCCCACTTTCTTATTGGACGGCCTCGCCAGCGGAGTTTCGGGCATGGCCGGTCTTGGTAGAACCAGAATCGCTGTTCCTTCTCAATTCGCATCCGCTTTTAGCTTCCACAGGAAATTCGCCATTTGCCTCTCGTCCAGTTCAAAGGGTGTTGTTTTCTTTGGAGACGGCCCTTACGTTTTTCTTCCGAACGTCAACGCCGCTGAATCCCTCACCTACACCCCACTCATTGTCAACCCAGTAAGCACAGCCTCCGCTTTCACACAAGGACAGCCTTCGTCTGAGTATTTCATCGGAGTCAAATCCATCAAAATCGACCAAAACGTCGTGCCCAACATCAACACCACTTTGCTGTCCATAGACGAGGAAGGCGTTGGTGGGACTAAGATAAGTACGGTGAACCCGTACACAGTTTTGGAGGCGTCTATCTTCAAGGCGGTGACGGAGGCATTCGTCAGTGCTTCGGCTGCTAGGAACATCACCAGGGTGGCTGGTGTGGCTCCCTTCGAAGTGTGTTTCAGTATGGAGAACGTGTGGGGCACGCGGTTGGGTGCGGCGGTGCCGACCATCGAGCTTGTGCTTCAGAATAATGTGAGTTGGTTCATTTTTGGAGCGAACTCGATGGTGCAGGTGAAGGACGATGTGCTGTGTCTTGGGGTAGTGAATGGAGGTGACAGCCCAAGGACTTCAATAGCGATGGGAGGGTATCAATTGGAGAACAATCTTCTGCAGTTTGATCTGGCTTCTTCCAGATTAGGATTCAGCTCTTTGCTCTTTGGAAGGATGACTACCTGTGCAAACTTCAACTTCACCTCTGCTCCATAA 1302 0.533 MASTFQFLLLLLLFVAPSPSAQSSFRPKALVIPVTKDASTLQYVTQIHQRTPLVPLNLVLNLGGQFLWVDCDQNYTSSTYRPARCNSAQCSLADASGCGECFSPPRPGCNNNTCGVMPDNTVTRTATSGEVAQDVVAVQSTNGFNPGRKVAIARFIFSCAPTFLLDGLASGVSGMAGLGRTRIAVPSQFASAFSFHRKFAICLSSSSKGVVFFGDGPYVFLPNVNAAESLTYTPLIVNPVSTASAFTQGQPSSEYFIGVKSIKIDQNVVPNINTTLLSIDEEGVGGTKISTVNPYTVLEASIFKAVTEAFVSASAARNITRVAGVAPFEVCFSMENVWGTRLGAAVPTIELVLQNNVSWFIFGANSMVQVKDDVLCLGVVNGGDSPRTSIAMGGYQLENNLLQFDLASSRLGFSSLLFGRMTTCANFNFTSAP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0423 433 FunFam Basic 7S globulin 216 431 - -
Lele16g0423 433 Pfam Xylanase inhibitor N-terminal 43 215 IPR032861 -
Lele16g0423 433 FunFam Basic 7S globulin 23 215 - -
Lele16g0423 433 SUPERFAMILY Acid proteases 34 424 IPR021109 -
Lele16g0423 433 Gene3D Acid Proteases 216 431 IPR021109 -
Lele16g0423 433 CDD xylanase_inhibitor_I_like 63 417 IPR033868 -
Lele16g0423 433 Pfam Xylanase inhibitor C-terminal 254 414 IPR032799 -
Lele16g0423 433 Gene3D Acid Proteases 27 215 IPR021109 -
Lele16g0423 433 PANTHER ASPARTYL PROTEASE-RELATED 8 431 IPR001461 GO:0004190|GO:0006508
Lele16g0423 433 ProSiteProfiles Peptidase family A1 domain profile. 43 414 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0423 Lele-ChrLele16 2282576 2283877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0423 27 415 Miscellaneous Gene Families AT1G44130 20.925 3.35e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1357 06 8706542 8707600 Lele16g0423 16 2282576 2283877 CCT
Lele07g1564 07 9637722 9638726 Lele16g0423 16 2282576 2283877 CCT
Lele08g1354 08 8650102 8653633 Lele16g0423 16 2282576 2283877 CCT
Lele16g0423 16 2282576 2283877 Lele05g1490 05 9540334 9540921 CCT
Lele16g0423 16 2282576 2283877 Lele07g1550 07 9551029 9551916 CCT
Lele16g0423 16 2282576 2283877 Lele16g0423 16 2282576 2283877 ECH
Lele13g2004 13 27377195 27380781 Lele16g0423 16 2282576 2283877 hybridization
Lele14g1939 14 25713330 25714109 Lele16g0423 16 2282576 2283877 hybridization