Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0421 ATGAGCATCTCTATGGTGATGATGAGCAGAAATGCAACACAGCCCCTAATCAACAGTCCTTCCGGCGGTCGAAAATTGAATCTGATCAATCTTCCACGGCAGAAAGAGAAGGTGGTGGTGGTCATGGGAGCCACCGGCGCAGGAAAGTCCAGGCTCTCCATCGACCTCGCCACCCTTTTTCCTGCACAGATCATCAACTCCGACAAAATGCAAGTCTACAAAGGCCTTGACATAGCCACGAACAAAATCACCAACGAAGACCGACGGGGGGTGCCCCACCATTTGTTAGGAACAGAGAACCCCAACTCAGAGTTCACGGCCACCCACTTCCGTGAAGCTGCTTTACTCGCCATCGACTCAATTACGTCTTGCGGACAGCTACCGATCATCGTGGGAGGATCCAACTCGTATATTGAGGCACTAATCGACGACGACGACTATAAATTCCGATCGAGGTATGATTTCTGTTGTCTCTGGGTAGACGTGTCAATGCCCGTGCTCGATCAATACGTGGCCAGACGGGTTGATCAAATGCTGGAGAGTGGAATGGTAGGTGAACTGAGACCCTTTTTCAATCCAAATGGAGACTACTCACGAGGGATTAGAAAAGCCATCGGAGTTCCTGAGTTCGATCAGTATTTTCGAAACGAATCGTTGATTAGGGATGAAGGAATCAAGCAGAGGTTAATGGAAGAAGCGGTGGATGAAATTAAGAAAAACACGTACAAATTGGCACGTAAACAATTGGGGAAGATTCAGAGACTGCGCAATGTGAAGAGATGGAAGATTCAGCGGCTAGACGCGACAACCGTGTTCCGCAAGCATGGGGTAGAAGCAGAGGAGGAATGGAAGAAGGTGGTGGCAGAGACAAGTGCTATGGTCGTCGCCAGGTTTCTTTACGATTTTCCCTCTGCGAATGTTGGCGCTCGCCTTAGACCGTCGTCATCTTCATCATCGGCCCTGGAAAGCGCCATGGCTACGGCAACGTGCTGA 993 0.4995 MSISMVMMSRNATQPLINSPSGGRKLNLINLPRQKEKVVVVMGATGAGKSRLSIDLATLFPAQIINSDKMQVYKGLDIATNKITNEDRRGVPHHLLGTENPNSEFTATHFREAALLAIDSITSCGQLPIIVGGSNSYIEALIDDDDYKFRSRYDFCCLWVDVSMPVLDQYVARRVDQMLESGMVGELRPFFNPNGDYSRGIRKAIGVPEFDQYFRNESLIRDEGIKQRLMEEAVDEIKKNTYKLARKQLGKIQRLRNVKRWKIQRLDATTVFRKHGVEAEEEWKKVVAETSAMVVARFLYDFPSANVGARLRPSSSSSSALESAMATATC 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0421 330 FunFam Adenylate isopentenyltransferase 5, chloroplastic 164 263 - -
Lele16g0421 330 Gene3D - 35 299 IPR027417 -
Lele16g0421 330 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 164 263 - -
Lele16g0421 330 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 35 298 IPR039657 -
Lele16g0421 330 Pfam IPP transferase 71 144 - -
Lele16g0421 330 Pfam IPP transferase 149 249 - -
Lele16g0421 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0421 Lele-ChrLele16 2273723 2274715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0421 151 299 C2H2 Transcription Factor Family AT2G27760 30.857 6.45e-22 94.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1503 05 9628194 9629195 Lele16g0421 16 2273723 2274715 CCT
Lele16g0421 16 2273723 2274715 Lele16g0421 16 2273723 2274715 ECH
Lele13g2006 13 27392175 27393173 Lele16g0421 16 2273723 2274715 hybridization
Lele14g1941 14 25722144 25723136 Lele16g0421 16 2273723 2274715 hybridization