Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0400 ATGGCTGGTAGCAATGAAGTCAACCTCAATGAATCCAAGAGTGTCGTCCCGTTGAATACTTGGGTTCTTATTTCCAATTTCAAGCTGGCCTACAATCTACTTAGACGCGCCGATGGAACCTTCAATCGCGAGTTGGCCGAGTTCCTTGACCGGAAGGTGCCCCCCAATACAATTCCGGTCGACGGGGTATTCTCTTTCGACCATGTTGATCGAAACGCCGGCCTTTTCAATCGGGTGTATCAACCAGCTCCAGAACAGGAGTCCCAGTGGGGCATTATAGAGCTTGAAAGGCCCTTGAGCACGAGCAAGATCGTCCCTGTCATAATTTTCTTCCATGGCGGAAGCTTCTCTCATTCATCTGCTAATAGTGCGATCTACGACACTTTCTGCCGGCGCCTTGTGAACATCTGTAAGGCAGTTGTGGTCTCTGTTAACTACCGCCGATCACCAGAACATCGATATCCGTGTGCATACGACGATGGCTGGGCTGCACTTAAATGGGTTAAATCAAGAACGTGGCTTCAGAGCGGAAAGGATTCCAAGGTTCATGTATACTTGGCTGGCGACAGTTCAGGCGGTAACATCGTTCACCACGTAGCGGCGAGGGCTGGCGAGGAAGATATTGAAGTGCTGGGTAACATCCTGCTTCATCCATTGTTTGGAGGAGAGAAGCGCACAGAGTCGGAGAAGAAACTGGATGGGAAGTACTTTGTGAGATTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTGCCGGAAGGAGAAGACAGGGATCATCCGGCATGTAATCCATTTGGCCCAAGAGGGAAAAGCCTCGTAGGACTCAGGTTCCCTAAAAGTCTTGTGTGTGTGGCCGGTTTGGATCTTGTCCAAGATTGGCAACTGGCATATGTGGACGGTCTCAAGAATTCAGGCCACGAGGTTAAACTTGTTTACCTAAAGGAGGCCACGATCGGGTTCTACTTCTTGCCGAATAATGATCACTTCTATTGCCTTATGGAGGAGATAAACCACTTCGTGAATTCTAACTGTTAA 1035 0.4899 MAGSNEVNLNESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPPNTIPVDGVFSFDHVDRNAGLFNRVYQPAPEQESQWGIIELERPLSTSKIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNICKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRTWLQSGKDSKVHVYLAGDSSGGNIVHHVAARAGEEDIEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPRGKSLVGLRFPKSLVCVAGLDLVQDWQLAYVDGLKNSGHEVKLVYLKEATIGFYFLPNNDHFYCLMEEINHFVNSNC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0400 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Lele16g0400 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Lele16g0400 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Lele16g0400 344 FunFam Gibberellin receptor GID1 1 342 - -
Lele16g0400 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Lele16g0400 344 SUPERFAMILY alpha/beta-Hydrolases 73 341 IPR029058 -
Lele16g0400 344 PANTHER ARYLACETAMIDE DEACETYLASE 43 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0400 Lele-ChrLele16 2181150 2182773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0400 1 342 Carbohydrate Esterase AT3G63010 77.843 0.0 572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0978 05 6047081 6050495 Lele16g0400 16 2181150 2182773 CCT
Lele13g2025 13 27504083 27507281 Lele16g0400 16 2181150 2182773 hybridization
Lele14g1959 14 25847884 25850261 Lele16g0400 16 2181150 2182773 hybridization