Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0379 ATGGAAGCATTACAGTTCCAGAGTCTCCGGATGGTTAATCGAACTATTTCTTGCACGTTTCCTTCCAGAACATCCAGGCAGAATTTTGGGGTTTCAAATGCACGGTTATTGTTCTTGTTTCTGAACCGATCACCTCCCAGACCAGTCTCCTTCAAAATCGAAGCAAATAATTCGAATTTCACTATCTCTTACCTCATAGATTCTTGTGGATTGGCTCCGGAAGCTGCTACTTCAATTTCGCAGAAGGTACAGCTGCATTCAAGAGAGAAACCGGACACTGTCCTAACGCTGCTCAGAGAACACGGCGTCTCAAAATCCCAGATTTCAAATGTCGTCAGGAAGCGTCCATCGCTCCTTCTAGCTAATGCCAACGATATCCTTTTGCCCAAACTTGAATTTTTTTACTCCATAGGGATTTCCAGGTCTGACCTAGCAAGAATCCTCGCTGCAGACCCGACCGTTTTGACAAGAAGCTTGGAGAAACAGATAATTCCTTCTTATAATTTCCTCAAAAGCGTGTTGCTGTCTGATGAGAAGGTCGCCTCTGCCTTGAAGCGCACGTCGTGGATTTTCCTGGAAGACCATTCGAAGAAGCTCTTACCAAATATCTCTGTTCTGAGAGCAACGGGTGTGCCAGAATCATGCCTTGCATTGTTGCTCGCTCATTTTCCTGAGACATTAATTCAAAAGAACGATCAAATCGTAAAGACCGTCGAAGAGATCAAGGAATTGGGATTCGATCCAACCAAGTCGACATTTGTGCTAGCGATTCACGTAATGGCAGGTAATAAATCGATATATAATCGCTGTTTCGAGGTATACCAGAGGTGGGGCTGGTCGGAGGATGAGATTCTAATGTCATTCAGAAAGCATCCGAACTGTATGCTTCTATCGGAGGATAAAATAACGAAAGCAATGGACTTCCTCGTGAACAAGATGGGTTGGCCTTCAGGGATGATAGCGAAATGCCCAGTGGTGTTGTTTTTTAGCCTGGAAAAGAGAATCAAGCCGAGGTGTTCAGTTGTTCAGGCTCTGCGATTGAAGGGGTTGATCAAGAAGACTCTGAGCTTGTCTACCGTGTTGTTGCCGGATCAGAAGTGTTTCGTGGAGAAGTTTGTGACAAAGTATGAGCATCATGTGCCTGAATTGTGGAGTATCTATGAGATGAAAGTCGATTTTAGGAGCGTCGTTTGA 1194 0.4464 MEALQFQSLRMVNRTISCTFPSRTSRQNFGVSNARLLFLFLNRSPPRPVSFKIEANNSNFTISYLIDSCGLAPEAATSISQKVQLHSREKPDTVLTLLREHGVSKSQISNVVRKRPSLLLANANDILLPKLEFFYSIGISRSDLARILAADPTVLTRSLEKQIIPSYNFLKSVLLSDEKVASALKRTSWIFLEDHSKKLLPNISVLRATGVPESCLALLLAHFPETLIQKNDQIVKTVEEIKELGFDPTKSTFVLAIHVMAGNKSIYNRCFEVYQRWGWSEDEILMSFRKHPNCMLLSEDKITKAMDFLVNKMGWPSGMIAKCPVVLFFSLEKRIKPRCSVVQALRLKGLIKKTLSLSTVLLPDQKCFVEKFVTKYEHHVPELWSIYEMKVDFRSVV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0379 397 FunFam Mitochondrial transcription termination factor-like 159 380 - -
Lele16g0379 397 SMART mt_12 181 212 IPR003690 GO:0003690|GO:0006355
Lele16g0379 397 SMART mt_12 109 140 IPR003690 GO:0003690|GO:0006355
Lele16g0379 397 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Lele16g0379 397 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Lele16g0379 397 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Lele16g0379 397 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Lele16g0379 397 Pfam mTERF 95 248 IPR003690 GO:0003690|GO:0006355
Lele16g0379 397 Pfam mTERF 220 367 IPR003690 GO:0003690|GO:0006355
Lele16g0379 397 Gene3D Transcription termination factor 3, mitochondrial 158 381 IPR038538 -
Lele16g0379 397 PANTHER CGI-12 PROTEIN-RELATED 58 376 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0379 Lele-ChrLele16 2076041 2077234 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele16g0379 mTERF 1.1e-26 No_clan