Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0376 ATGGAGGTTTTGAAAGACGAGTTTTCAGAGCTAGAGATTGGGAATTCAGTGGAGTCGTTCCAGAAATTTCTGGTTTCGCAAAGGGAGCTCTTTCATAGCCAGATCGATCAGCTTCAGAAGATCGTCGTTACGCAATGCAAACTCACTGGTGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGCGCTCTGTCAATAAAAATTGGAAAAAGACCCAGGGATTTGTTAAACCCAAAAGCTGTAAATTACATGCAATTAGTTTTCTCCATTAAAGATGCAATCAGTAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGTGTCACAGTGACACAGGTTCGCAAATTTTTCAATAGTCAACGTTCAAGAGTGAGAAGACAAGTTCAGTTGTCAGGTGAAAGGGTGGTAAGATCTAACTACTGTGAAGAACCTCGTGATGGGTTCCCAATAAACTCTGATTCTATGATACCAATTAATCCATCTCCCTTAAACTCTGCCGGTCCCATCAGCGTGGATGAAGCTTCTTGTTCAACACAGGAAAATTCATTTTCTGGCCTAAATGGCTCAGAGAAACATTTTGTTGATAATATTTTTAGTTTAATGCGGAAAGAGGAAACATTTTCGGGCCAGGTGAAATCGTTGGAGTGGATATTGAAGATACAGAATGCTTCAGTATTAATTTGGTTTTTAGACTGTGGAGGCGTGATGATTTTAGCAGCGTGGTTGAATGAAGCAGCTGTTGAAGAGCAAACAAGTGTTCTTCTTCTTATTTTAAAGGTGCTTTGTCATTTGCCTCTGCATAAGGCCCTTCCTACGCATATTTCAGCTACATTGCAGTGTGTTAATAGACTTCGGTTTCACAGGACACCAGGCATATCAAACAGTGCACGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCGAAGAACCAAGCAATAAAGAAAACCGCTGGTGTTAAACCTGGTAGTGAGGCTCTAAAGGAGATGGTTGATCAGAGGGTTTGTCAAATTATGGGTTCTGAATCATGGAATTCAAATGTCGATATTCCTGAGGACATTCTTGCCCTTTCAAATGAAGGTTCAGATGATTTCAGGAAACCAGAAGCTCCACGAGCTGTGAAATTATTGACAGCTTCTTCAGATGATTCTCCTAAGAAGTCTGTCCTAGGTGTATCAATGTCTCAGACTAGGGAGCGCAGAAAAGTGCAGTTAGTGGAGCAGTCAGGCCAAAAGACAGTTAGCAGAAGTCCTCAAGCTGCAAGAGTAGGGCCTGTAAGTCAAGGTCGTCCCATGTCTACTGATGATATCCAGAAAGCAAAAATGCGTGCTATATTTATGCAAAGCAAATATGGGAAACCTGGTTCTTCTAAAGGAAATAAAGAAGCAAGGACTGATGGTCTGAATAAACCTCATACAAATCAGGCCGGTCTTGGGGCTTCCTTATCTAAAGCTCCTGTATCAACCAAAACTGATGAAGATGGCAAACCTCTGTTGCTTCCTTCTAAAACTTCTAATATGAAGGATGCTTCTACTGAATCATATTCGAGCATGCATTTGAAGGAACCTTTCTGGGAGAAATGCAAGCAGGTGCAAATCTCGTGGAAGACACCAGCAGAGGTGAAACTCAACGATACCTGGAGAGTTGGTGCTGGTGAAAACAGCAAAGAGGTTGATGTTCAGAAAAGTAGAAATCGGAGAGGGGAGGAGATAATTTATCGGGCTATCCTGGAGAGGCCACTTAATCCCAACGAGCCATGGGACCTCGAAATGGACTACGATGATACATTGACCCCACCAATTCCTATTGAACAGCTTCCTGATGTTGATGGTGCAGAAACACCAGCTCCCGCTAATGAAGGTATTCAAGTGACGACCCCTTCATCTTCCAACGCTAATGCAAATGTTGCTGAGCCTGATCTGGAGCTGCTTGCTGTACTTCTTAAAAATCCCGAGTTGGTGTTTGCTTTGACTTCTGGGAAAGCTGGTAGAATACCGAGTGAGGAAACGGTAAAACTGCTTGATATGATAAAAGAAGGTAGTGTCCATTTGGCTGACAATGTTGGAACAGCGCAGGAGAAGGTGGAAGTTTCTCTTCCTTCTCCAACTCCTTCTAACGATCCAAGAACGGGTGGGTGGACGTCAGAAGTTGCAAAGAATCCTTTTTCGCGCCACAACCTGGTGCCTGACAGAAGTATCAGCTTTCCAGCAGCTGCAACCCACCGCATGGTATTGCCTCAGGTTCCAGCAGCCCCTAACGTTGTTTCTGGCATCACATCACGGCAACATCAAACTGATTCACTGTCTCAAGCACCTAATGTTGTTTCTGTATTTTCCTCTGTGCATCAGTCTCTGCTTACTAATTTTCCAACGACACAAATGCTATCATCAAACATAGGTTTAAGTACCATGATGGACGACATAATCCCTGCTACGTCTGTTAACTTATCCGCTACACACCCACCTTTAGCAATGCGGGTAGATAGCACCAATATCAGTAGTAATGTAAAACCAATATCTAATTTGAGAATACAAGAGGGATTGTCTAATTCACATCTGCAATCTTATGAGCTGCTATCACCAACGCCAACGCCAACACCAACACTATCAAGTTCAGTCACAACCCCACAAAGGCATTCCCATTTATTGCAGCAGTCCCATTTTAATGAGCCTTCATCTCACAACTCTCTGCATTCCTACCCTCCTCCAAGGGAAAAACAAGCCGATGTTCAAGAGTCTTGGAGAGTTAGGCAGGATATATCCTCCAGTTATCATTCTCAAGTAAATCAGAACACTTATAACGCATCAGTTGAAAGACCCAAGCGATCTGGTTCTCCTTGGGAGAGAAATGATTATGGTGGAGGAGGAGGAGGAGGAGAATTTGAATCATGGAGTCCAGATAATAGTCCAAGTAGAAATAATGGGTATATTAGGGGAAGGAGCTTCCCTGAATCCAGAATGAATCCTGGGAGGAACTATAGGCCTGAATGGTCAAGACAACGGGGTTCTTCTGGTCACTGGGATCCAAATAGACAAGGAAGCAGGAAGTGGCATGATCAGAGGCGATGA 3063 0.4323 MEVLKDEFSELEIGNSVESFQKFLVSQRELFHSQIDQLQKIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQLVFSIKDAISKKESREISALFGVTVTQVRKFFNSQRSRVRRQVQLSGERVVRSNYCEEPRDGFPINSDSMIPINPSPLNSAGPISVDEASCSTQENSFSGLNGSEKHFVDNIFSLMRKEETFSGQVKSLEWILKIQNASVLIWFLDCGGVMILAAWLNEAAVEEQTSVLLLILKVLCHLPLHKALPTHISATLQCVNRLRFHRTPGISNSARVLLSKWSKLLAKNQAIKKTAGVKPGSEALKEMVDQRVCQIMGSESWNSNVDIPEDILALSNEGSDDFRKPEAPRAVKLLTASSDDSPKKSVLGVSMSQTRERRKVQLVEQSGQKTVSRSPQAARVGPVSQGRPMSTDDIQKAKMRAIFMQSKYGKPGSSKGNKEARTDGLNKPHTNQAGLGASLSKAPVSTKTDEDGKPLLLPSKTSNMKDASTESYSSMHLKEPFWEKCKQVQISWKTPAEVKLNDTWRVGAGENSKEVDVQKSRNRRGEEIIYRAILERPLNPNEPWDLEMDYDDTLTPPIPIEQLPDVDGAETPAPANEGIQVTTPSSSNANANVAEPDLELLAVLLKNPELVFALTSGKAGRIPSEETVKLLDMIKEGSVHLADNVGTAQEKVEVSLPSPTPSNDPRTGGWTSEVAKNPFSRHNLVPDRSISFPAAATHRMVLPQVPAAPNVVSGITSRQHQTDSLSQAPNVVSVFSSVHQSLLTNFPTTQMLSSNIGLSTMMDDIIPATSVNLSATHPPLAMRVDSTNISSNVKPISNLRIQEGLSNSHLQSYELLSPTPTPTPTLSSSVTTPQRHSHLLQQSHFNEPSSHNSLHSYPPPREKQADVQESWRVRQDISSSYHSQVNQNTYNASVERPKRSGSPWERNDYGGGGGGGEFESWSPDNSPSRNNGYIRGRSFPESRMNPGRNYRPEWSRQRGSSGHWDPNRQGSRKWHDQRR 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0376 1020 CDD homeodomain 69 126 IPR001356 GO:0003677
Lele16g0376 1020 SMART HOX_1 68 130 IPR001356 GO:0003677
Lele16g0376 1020 MobiDBLite consensus disorder prediction 467 486 - -
Lele16g0376 1020 MobiDBLite consensus disorder prediction 854 898 - -
Lele16g0376 1020 MobiDBLite consensus disorder prediction 405 420 - -
Lele16g0376 1020 MobiDBLite consensus disorder prediction 375 431 - -
Lele16g0376 1020 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Lele16g0376 1020 Gene3D - 68 135 - -
Lele16g0376 1020 MobiDBLite consensus disorder prediction 379 397 - -
Lele16g0376 1020 MobiDBLite consensus disorder prediction 854 1020 - -
Lele16g0376 1020 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Lele16g0376 1020 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1005 - -
Lele16g0376 1020 MobiDBLite consensus disorder prediction 446 507 - -
Lele16g0376 1020 MobiDBLite consensus disorder prediction 912 937 - -
Lele16g0376 1020 MobiDBLite consensus disorder prediction 962 976 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0376 Lele-ChrLele16 2055867 2063760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0376 1 726 Homeobox Transcription Factor Family AT4G02560 49.375 0.0 663