Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0374 ATGAAGATTTTGAGAGACGAAGGAGTGCCTCAATCTTTGGTCTTCTATCTGTTATATAGTCGTGCAAATGTAGCATTTATGGATCAATCAATGTTTGGTGAACATGTCAAGTTTGTGGAGGAAACAGGAATCGAACCTTTCGAGTTTGCGTTTGTTGATGCACTTATTGTTGTAACACGGATGGGTAAATCAACCTGGGAGATAAAACTGAAAATCCTTGAGAGGTTGGGCTGGTCCAGGGATGTCACGCTTTTGGCATTCAGTAAGCAACCAAAGATCATGGGTATATCAGAGGAAAAAATCGTAAAAATTATGAAATTTCTTGTGGATGAAATGGGTTTACGGTCAAAAGATATTGCTAGTTACCCGACAATTCTTTGCTATAGCTTCAATCAGAGGATTATTCCTAGATGCTCTGTATCTACCAAGGAATTATCCGATTTGAAAGAATCACACACTAATCTTAACGCAACAGAGTCTGAGAGGCTTAGAACTGCTTCCAACTCCAATCTTCGTTATAGCCAATGTTACTGTGGAACTCCTGCAAATTCGGCGCCATAG 561 0.3975 MKILRDEGVPQSLVFYLLYSRANVAFMDQSMFGEHVKFVEETGIEPFEFAFVDALIVVTRMGKSTWEIKLKILERLGWSRDVTLLAFSKQPKIMGISEEKIVKIMKFLVDEMGLRSKDIASYPTILCYSFNQRIIPRCSVSTKELSDLKESHTNLNATESERLRTASNSNLRYSQCYCGTPANSAP 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0374 186 Pfam mTERF 2 103 IPR003690 GO:0003690|GO:0006355
Lele16g0374 186 Pfam mTERF 63 144 IPR003690 GO:0003690|GO:0006355
Lele16g0374 186 Gene3D Transcription termination factor 3, mitochondrial 1 165 IPR038538 -
Lele16g0374 186 SMART mt_12 84 115 IPR003690 GO:0003690|GO:0006355
Lele16g0374 186 SMART mt_12 116 151 IPR003690 GO:0003690|GO:0006355
Lele16g0374 186 PANTHER CGI-12 PROTEIN-RELATED 3 148 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0374 Lele-ChrLele16 2045906 2048436 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele16g0374 mTERF 8.7e-11 No_clan